Swiss-Czech Proteomics Server

Abbreviation:SWICZ

General Information

Proteomics database for streptomyces and caulobacter and neisseria. Unique database in the field, containing knowledge based data of time series of protein expression for various stages of development of the given species.

Homepage http://proteom.biomed.cas.cz/

Countries that developed this resource Czech Republic

Created in 2001

Taxonomic range

Caulobacter crescentus

Neisseria meningitidis

Streptomyces coelicolor

Streptomyces granaticolor

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: SWICZ; Swiss-Czech Proteomics Server; DOI: https://doi.org/10.25504/FAIRsharing.1h7yt4; Last edited: Jan. 3, 2020, 3:44 p.m.; Last accessed: Dec 02 2020 6:50 a.m.

This record is maintained by krapnik ORCID

Record added: Nov. 23, 2016, 12:52 a.m.
Record updated: Dec. 24, 2019, 1:32 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.1h7yt4' by 'The FAIRsharing Team' at 13:32, 24 Dec 2019 (approved):

	'organizations' has been modified:
		Before:
			Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Undefined
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Funds
		After:
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Funds
			Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Funds
		Added:
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Funds
		Removed:
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Undefined

	'dataProcesses' has been modified:
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			browse
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			browse
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Edits to 'https://fairsharing.org/FAIRsharing.1h7yt4' by 'The FAIRsharing Team' at 13:32, 24 Dec 2019 (approved):

	'organizations' has been modified:
		Before:
			Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Undefined
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Undefined
		After:
			Biozentrum, University of Basel, Basel, Switzerland|http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/schwede/|Maintains
			ELIXIR Czech Republic|https://www.elixir-czech.cz/|Undefined
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Funds
		Added:
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Funds
		Removed:
			Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic|http://mbucas.cz/en/|Undefined

	'supportLinks' has been modified:
		Before:
			help|http://proteom.biomed.cas.cz/link_swicz.php
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			help|http://proteom.biomed.cas.cz/link_swicz.php

	'onto_disciplines' has been modified:
		Before:
			Life Science
			Proteomics
		After:
			Developmental Biology
			Life Science
			Proteomics
		Added:
			Developmental Biology
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	'onto_domains' has been modified:
		Before:
			life cycle stage
		After:
			Protein Expression
			life cycle stage
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			Protein Expression
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	'contact' has been modified:
		Before: Ing. Ji?? Vohradsk?, PhD.
		After: Ing. Ji?? Vohradsk?

	'miriam_id' has been modified:
		Before: None
		After:

In Collections

EOSC-Life

Support

No support information provided.

Additional Information

Contact

Ing. Jiří Vohradský

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Data Access

browse

http://proteom.biomed.cas.cz/

Publications

Proteome of Caulobacter crescentus cell cycle publicly accessible on SWICZ server

Vohradsky J., Janda I., Grünenfelder B., Berndt P., Röder D., Langen H., Weiser J., Jenal U.
Proteomics 2003

View Paper (PubMed) View Publication

Systems level analysis of protein synthesis patterns associated with bacterial growth and metabolic transitions

Vohradsky J., Thompson C.J.
Proteomics 2006

View Paper (PubMed) View Publication

Activation and expression of proteins during synchronous germination of aerial spores of Streptomyces granaticolor.

Bobek J,Halada P,Angelis J,Vohradsky J,Mikulik K
Proteomics 2004

View Paper (PubMed) View Publication

The iron-regulated transcriptome and proteome of Neisseria meningitidis serogroup C.

Basler M,Linhartova I,Halada P,Novotna J,Bezouskova S,Osicka R,Weiser J,Vohradsky J,Sebo P
Proteomics 2006

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

No related databases defined

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by krapnik ORCID

Funds

Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic (Research institute)
ELIXIR Czech Republic (Government body)

Maintains

Biozentrum, University of Basel, Basel, Switzerland (Lab)

Swiss-Czech Proteomics Server

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