TogoVar
General Information
TogoVar (NBDC's integrated database of Japanese genomic variation) is a database that has collected and organized genome sequence differences between individuals (variants) in the Japanese population and disease information associated with them.
TogoVar provides variant frequencies in the Japanese population that have been aggregated across research projects. Two available datasets, JGA-NGS and JGA-SNP, are obtained by aggregating individual genomic data that have been registered in the NBDC Human Database / Japanese Genotype-phenotype Archive (JGA). In addition, TogoVar integrates information related to genotypes or phenotypes that has been compiled independently in a variety of different databases and provides information for interpreting variants in a one-stop, easy-to-understand manner.
TogoVar has been developed as a joint research project of National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST) and Database Center for Life Science (DBCLS), Joint Support-Center for Data Science Research, Research Organization of Information and Systems (ROIS) .
How to cite this record
FAIRsharing.org: TogoVar; TogoVar; DOI: https://doi.org/10.25504/FAIRsharing.1ong6b;
Last edited: July 16, 2019, 3:08 p.m.; Last accessed: Oct 24 2020 9:38 a.m.
Record added: Oct. 19, 2018, 2:28 a.m.
Record updated:
July 16, 2019, 1:27 p.m. by The FAIRsharing Team.
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Edits to 'https://fairsharing.org/FAIRsharing.1ong6b' by 'The FAIRsharing Team' at 13:27, 16 Jul 2019 (approved):
'user_defined_tags' has been modified:
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Japanese population
genomic variation
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Japanese population
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genomic variation
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allele frequency
next generation DNA sequencing
variant
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SNP
allele frequency
next generation DNA sequencing
variant
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SNP
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Edits to 'https://fairsharing.org/FAIRsharing.1ong6b' by 'The FAIRsharing Team' at 13:13, 05 Nov 2018 (approved):
'domains' has been modified:
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Allele frequency
Japanese population
Life Science
genomic variation
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Allele frequency
Japanese population
Life Science
Next generation DNA sequencing
Sequence variant
genomic variation
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Next generation DNA sequencing
Sequence variant
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Open Data Commons Open Database License (ODC ODbL)|http://opendatacommons.org/licenses/odbl/1.0/|Data
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Open Data Commons Open Database License (ODC ODbL)|http://opendatacommons.org/licenses/odbl/1.0/|Data
TogoVar Terms of Use and Attribution|https://togovar.biosciencedbc.jp/doc/terms|Data
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TogoVar Terms of Use and Attribution|https://togovar.biosciencedbc.jp/doc/terms|Data
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FAQ|https://togovar.biosciencedbc.jp/doc/help?locale=en
email|togovar@biosciencedbc.jp
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FAQ|https://togovar.biosciencedbc.jp/doc/help?locale=en
email|togovar@biosciencedbc.jp
online documentation|https://togovar.biosciencedbc.jp/doc/about
online documentation|https://togovar.biosciencedbc.jp/doc/datasets
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online documentation|https://togovar.biosciencedbc.jp/doc/about
online documentation|https://togovar.biosciencedbc.jp/doc/datasets
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Edits to 'https://fairsharing.org/FAIRsharing.1ong6b' by 'yatsuzuka' at 10:13, 23 Oct 2018 (approved):
'domains' has been modified:
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Life Science
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Allele frequency
Japanese population
Life Science
NGS
genomic variation
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Allele frequency
Japanese population
NGS
genomic variation
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Resource Description Framework
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Japanese population
allele frequency
genomic variation
integrated database
variant annotation
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Homo sapiens
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Homo sapiens
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Japanese population
allele frequency
genomic variation
integrated database
variant annotation
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ClinVar
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ClinVar
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No metrics standards defined
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This record is not implemented by any policy.
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