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The DNA Replication Origin Database

Abbreviation:OriDB

General Information

This database summarizes our knowledge of replication origins in the budding yeast Saccharomyces cerevisiae. Each proposed origin site has been assigned a Status (Confirmed, Likely, or Dubious) expressing the confidence that the site genuinely corresponds to an origin.

Homepage http://cerevisiae.oridb.org/

Countries that developed this resource United Kingdom

Taxonomic range

Saccharomyces cerevisiae

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: OriDB; The DNA Replication Origin Database; DOI: https://doi.org/10.25504/FAIRsharing.284kre; Last edited: April 26, 2021, 8:18 a.m.; Last accessed: Jan 29 2022 2:21 p.m.

Record updated: April 20, 2021, 2:09 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.284kre' by 'The FAIRsharing Team' at 14:09, 20 Apr 2021 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.284kre' by 'The FAIRsharing Team' at 12:02, 02 Dec 2016 (approved):

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Support

General

FAQ	http://cerevisiae.oridb.org/faq.php
help	http://cerevisiae.oridb.org/help.php
help	http://pombe.oridb.org/help.php

Additional Information

Contact

Conrad A. Nieduszynski ORCID

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

OriDB Attribution required

Data Release

daily release

No link recorded

Data Curation

manual curation

No link recorded

Data Access

file download(tab-delimited,CSV,images)	No link recorded
Download	http://cerevisiae.oridb.org/download_data.php

Publications

OriDB: a DNA replication origin database.

Nieduszynski CA., Hiraga S., Ak P., Benham CJ., Donaldson AD.,
Nucleic Acids Res. 2007

View Paper (PubMed) View Publication

OriDB, the DNA replication origin database updated and extended.

Siow CC., Nieduszynska SR., Müller CA., Nieduszynski CA.,
Nucleic Acids Res. 2012

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

UCSC Genome Browser database

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
National Science Foundation (NSF), USA (Government body)

Grant Number(s)

BB/E023754/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)
BB/G001596/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)
DBI-0416764 (National Science Foundation (NSF), USA)

The DNA Replication Origin Database

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