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ORTHOlogous MAmmalian Markers

Abbreviation:OrthoMaM

General Information

ORTHOlogous MAmmalian Markers database (OrthoMaM) describes the evolutionary dynamics of orthologous genes in mammalian genomes using a phylogenetic framework.

Homepage http://www.orthomam.univ-montp2.fr/orthomam/html/

Countries that developed this resource France

Created in 2007

Taxonomic range

Mammalia

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: OrthoMaM ; ORTHOlogous MAmmalian Markers; DOI: https://doi.org/10.25504/FAIRsharing.2GMztk; Last edited: Jan. 8, 2019, 1:26 p.m.; Last accessed: Jul 27 2021 4:22 a.m.

This record is maintained by edouzery

Record added: Aug. 1, 2018, 2:08 p.m.
Record updated: Aug. 29, 2018, 4:46 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 16:46, 29 Aug 2018 (approved):

	'contactORCID' has been modified:
		Before: https://orcid.org/0000-0001-5286-647X
		After: 0000-0001-5286-647X

Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 14:32, 01 Aug 2018 (approved):

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			help|http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=help
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			help|http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=help
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			OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.|Douzery EJ,Scornavacca C,Romiguier J,Belkhir K,Galtier N,Delsuc F,Ranwez V|Mol Biol Evol|2014
			OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics.|Ranwez V,Delsuc F,Ranwez S,Belkhir K,Tilak MK,Douzery EJ|BMC Evol Biol|2007
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			OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.|Douzery EJ,Scornavacca C,Romiguier J,Belkhir K,Galtier N,Delsuc F,Ranwez V|Mol Biol Evol|2014
			OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics.|Ranwez V,Delsuc F,Ranwez S,Belkhir K,Tilak MK,Douzery EJ|BMC Evol Biol|2007
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			browse
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			browse
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			blast
			Data release
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Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 14:17, 01 Aug 2018 (approved):

	'organizations' has been modified:
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			Montpellier Bioinformatics Biodiversity platform|http://kimura.univ-montp2.fr/remydernat/presentations/2017/MBI/20170925_presentation.pdf|Funds
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			Montpellier Bioinformatics Biodiversity platform|http://kimura.univ-montp2.fr/remydernat/presentations/2017/MBI/20170925_presentation.pdf|Funds
			 Agence Nationale de la Recherche Investissements davenir / Bioinformatique|http://www.agence-nationale-recherche.fr/investissementsdavenir/documents/ANR-AAP-BIOINFORMATIQUE-2010.pdf|Funds
			European Research Council (ERC)|https://erc.europa.eu/|Funds
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			 Agence Nationale de la Recherche Investissements davenir / Bioinformatique|http://www.agence-nationale-recherche.fr/investissementsdavenir/documents/ANR-AAP-BIOINFORMATIQUE-2010.pdf|Funds
			European Research Council (ERC)|https://erc.europa.eu/|Funds
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Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 14:15, 01 Aug 2018 (approved):

	'organizations' has been modified:
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			Montpellier Bioinformatics Biodiversity platform|http://kimura.univ-montp2.fr/remydernat/presentations/2017/MBI/20170925_presentation.pdf|Funds
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			Montpellier Bioinformatics Biodiversity platform|http://kimura.univ-montp2.fr/remydernat/presentations/2017/MBI/20170925_presentation.pdf|Funds
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Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 14:12, 01 Aug 2018 (approved):

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			Genome
			Life Science
			Orthologous
			Phylogenetics
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			Genome
			Life Science
			Orthologous
			Phylogenetics
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Edits to 'https://fairsharing.org/FAIRsharing.2GMztk' by 'The FAIRsharing Team' at 14:10, 01 Aug 2018 (approved):

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	'contact' has been modified:
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		After: Emmanuel Douzery

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		After: https://orcid.org/0000-0001-5286-647X

Support

General

help	http://www.orthomam.univ-montp2.fr/ortho ...

Additional Information

Contact

Emmanuel Douzery ORCID

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Data Release

Data release

http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=Ort ...

Data Access

browse	http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=exo ...
query	http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=Req ...
blast	http://www.orthomam.univ-montp2.fr/orthomam/html/index.php?article=bla ...

Publications

OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.

Douzery EJ,Scornavacca C,Romiguier J,Belkhir K,Galtier N,Delsuc F,Ranwez V
Mol Biol Evol 2014

View Paper (PubMed) View Publication

OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics.

Ranwez V,Delsuc F,Ranwez S,Belkhir K,Tilak MK,Douzery EJ
BMC Evol Biol 2007

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Ensembl

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by edouzery

Funds

The European Research Council (ERC) (Government body)
Montpellier Bioinformatics Biodiversity platform, France (Lab)
Agence Nationale de la Recherche Investissements davenir / Bioinformatique (Government body)

ORTHOlogous MAmmalian Markers

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