databases > DOI:10.25504/FAIRsharing.2c45na

ready PROkariotIC Database Of Gene-Regulation

Abbreviation:PRODORIC

General Information
PRODORIC is a comprehensive database about gene regulation and gene expression in prokaryotes. It includes a manually curated and unique collection of transcription factor binding sites.

Homepage http://prodoric.tu-bs.de/

Countries that developed this resource Germany

Created in 2002

Taxonomic range

Subjects 





How to cite this record FAIRsharing.org: PRODORIC; PROkariotIC Database Of Gene-Regulation; DOI: https://doi.org/10.25504/FAIRsharing.2c45na; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Apr 23 2021 1:12 a.m.


Record updated: Sept. 28, 2016, 12:18 p.m. by The FAIRsharing Team.

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Support

General

help http://prodoric.tu-bs.de/index.php?index ...

Additional Information

Contact Richard Münch

Tools
Predisi http://www.predisi.de
GBpro Genome Browser http://prodoric.tu-bs.de/gbpro.php 3.0
JVirgel http://www.jvirgel.de 2.0
Virtual Footprint http://prodoric.tu-bs.de/vfp/ 3.0
JCat http://www.jcat.de

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Curation

manual curation No link recorded
manual curation https://www.innatedb.com/doc/InnateDB_2011_curation_guide.pdf

Data Access

Download http://prodoric.tu-bs.de/download/prodoric.ddl
search http://prodoric.tu-bs.de/ssearch.php
analyze http://prodoric.tu-bs.de/index.php?index=3



Publications

PRODORIC (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes.

Grote A., Klein J., Retter I., Haddad I., Behling S., Bunk B., Biegler I., Yarmolinetz S., Jahn D., Münch R.,
Nucleic Acids Res. 2009

View Paper (PubMed)

PRODORIC: prokaryotic database of gene regulation.

Münch R., Hiller K., Barg H., Heldt D., Linz S., Wingender E., Jahn D.,
Nucleic Acids Res. 2003

View Paper (PubMed)

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

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Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

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Funds

Maintains

Grant Number(s)

  • 0313936C (Bundesministerium fur Bildung und Forschung)