standards > terminology artifact > DOI:10.25504/FAIRsharing.3kcgmr


ready Common Anatomy Reference Ontology

Abbreviation: CARO


General Information
The Common Anatomy Reference Ontology (CARO) is being developed to facilitate interoperability between existing anatomy ontologies for different species, and will provide a template for building new anatomy ontologies.

Homepage http://bioportal.bioontology.org/ontologies/CARO?p=summary

Countries that developed this resource United States

Created in 2007

Taxonomic range

Knowledge Domains 

User-defined Tags





How to cite this record FAIRsharing.org: CARO; Common Anatomy Reference Ontology; DOI: https://doi.org/10.25504/FAIRsharing.3kcgmr; Last edited: June 27, 2019, 2:59 p.m.; Last accessed: Nov 12 2019 8:11 a.m.


This record is maintained by mhaendel  ORCID

Record updated: June 24, 2019, 11 a.m. by The FAIRsharing Team.

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Support

No support information provided.

Additional Information

Contact Melissa Haendel   ORCID

External Links

Bioportal http://bioportal.bioontology.org/ontologies/CARO
OBO http://obofoundry.org/ontology/caro.html

Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

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Publications

CARO – The Common Anatomy Reference Ontology

Melissa A. Haendel, Fabian Neuhaus, David Osumi-Sutherland, Paula M. Mabee, Jos L.V. MejinoJr., Chris J. Mungall, Barry Smith
Anatomy Ontologies for Bioinformatics, Volume 6 of the series Computational Biology pp 327-349 2008

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Anatomy Ontologies for Bioinformatics

Albert Burger, Duncan Davidson and Richard Baldock
Springer 2008

Link to Publication

CARO Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

View in OBO Foundry.



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (2)
VectorBase
VectorBase is a web-accessible data repository for information about invertebrate vectors of human pathogens. VectorBase annotates and maintains vector genomes providing an integrated resource for the research community. Currently, VectorBase contains genome information for 38 organisms including Anopheles gambiae, a vector for the Plasmodium protozoan agent causing malaria, and Aedes aegypti, a vector for the flaviviral agents causing Yellow fever and Dengue fever. Recent additions include large scale variant (SNP) datasets and population genetics data (genotype/phenotype).
OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.

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