standards > model/format > DOI:10.25504/FAIRsharing.3pxg2f


ready Axt Alignment Format


General Information
Axt Alignment files are produced from Blastz, an alignment tool available from Webb Miller's lab at Penn State University. The axtNet and axtChain alignments are produced by processing the alignment files with additional utilities written by Jim Kent at UCSC.



How to cite this record FAIRsharing.org: Axt Alignment Format; Axt Alignment Format; DOI: https://doi.org/10.25504/FAIRsharing.3pxg2f; Last edited: Feb. 22, 2018, 2:13 p.m.; Last accessed: Nov 14 2018 9:57 p.m.


Record updated: Nov. 23, 2016, 3:37 p.m. by The FAIRsharing Team.

Show edit history



Support

General

Additional Information


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use





Publications

No publications available


Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined


Implementing Databases (1)
UCSC Genome Browser database
Genome assemblies and aligned annotations for a wide range of vertebrates and model organisms, along with an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic datasets.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Maintains