databases > DOI:10.25504/FAIRsharing.44yp73
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ready LegumeIP

General Information
The LegumeIP 2.0 database hosts large-scale genomics and transcriptomics data and provides integrative bioinformatics tools for the study of gene function and evolution in legumes.

Homepage http://plantgrn.noble.org/LegumeIP/

Countries that developed this resource United States

Created in 2011





How to cite this record FAIRsharing.org: LegumeIP; LegumeIP; DOI: https://doi.org/10.25504/FAIRsharing.44yp73; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Sep 22 2020 9:04 p.m.


Record updated: Nov. 21, 2018, 10:54 a.m. by The FAIRsharing Team.

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Support

General

support email bioinfo@noble.org
help http://plantgrn.noble.org/LegumeIP/help. ...

Additional Information

Contact Patrick X. Zhao


Access / Retrieve Data

Conditions of Use


Data Versioning

access to historical files available No link recorded

Data Release

annual release (if genomic sequences or gene models are updated in the five species) No link recorded

Data Curation

automated curation[comprehensive annotation tools, including BLAST, InterProscan, Dagchainer,TribeMCL,OrthoMCL] No link recorded

Data Access

file download(txt,XML) http://plantgrn.noble.org/LegumeIP/download.jsp
SQL database dump No link recorded
browse No link recorded
search No link recorded



Publications

LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes.

Li J,Dai X,Liu T,Zhao PX
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

LegumeIP 2.0--a platform for the study of gene function and genome evolution in legumes.

Li J,Dai X,Zhuang Z,Zhao PX
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

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Funds

Maintains

Grant Number(s)

  • ABI-0960897 (National Science Foundation (NSF), USA)

  • DBI: 1458597 (National Science Foundation (NSF), USA)