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Sweet Potato Ontology

Abbreviation: CO_331

General Information

Reference Plant Ontologies are being developed in the context of the Planteome project and are being integrated with the Crop Ontology, which provides harmonized breeders’ trait names, measurement methods, scales and standard variables for many crops. The Sweet Potato Ontology is one of these reference plant ontologies integrated within the Crop Ontology.

Homepage http://www.cropontology.org/ontology/CO_331/Sweet%20Potato

Countries that developed this resource Peru

Created in 2016

Taxonomic range

Ipomoea batatas

Knowledge Domains

Subjects

User-defined Tags

Data standards

General purpose

How to cite this record FAIRsharing.org: CO_331; Sweet Potato Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4g5qcw; Last edited: March 12, 2020, 3:45 p.m.; Last accessed: May 29 2020 9:33 p.m.

Record added: Oct. 12, 2017, 10:44 a.m.
Record updated: March 3, 2020, 8:04 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 20:04, 03 Mar 2020 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 12:24, 04 Feb 2020 (approved):

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			email|r.simon@cgiar.org
			email|helpdesk@cropontology-curationtool.org
			forum|http://www.cropontology.org/feedback
			help|http://www.cropontology.org/help
			online documentation|http://agroportal.lirmm.fr/ontologies/CO_331
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			email|r.simon@cgiar.org
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			online documentation|http://agroportal.lirmm.fr/ontologies/CO_331

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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 11:12, 04 Sep 2018 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 10:44, 04 Sep 2018 (approved):

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			email|r.simon@cgiar.org
			email|helpdesk@cropontology-curationtool.org
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			online documentation|http://agroportal.lirmm.fr/ontologies/CO_331
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			email|r.simon@cgiar.org
			email|helpdesk@cropontology-curationtool.org
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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 18:37, 29 Aug 2018 (approved):

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			The Sweetpotato Ontology|Vilma Rocio Hualla, Reinhard Simon, Robert Mwanga, Henry Saul Juarez Soto, Genoveva Rossel Montesinos |Proc. Intl Conf. on Dublin Core and Metadata Applications 2015|2015
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			The Sweetpotato Ontology|Vilma Rocio Hualla, Reinhard Simon, Robert Mwanga, Henry Saul Juarez Soto, Genoveva Rossel Montesinos |Proc. Intl Conf. on Dublin Core and Metadata Applications 2015|2015
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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 20:04, 25 Jan 2018 (approved):

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		Before: http://www.cropontology.org/ontology/CO_331
		After: http://www.cropontology.org/ontology/CO_331/Sweet%20Potato

Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 13:49, 16 Nov 2017 (approved):

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			Creative Commons Attribution (CC-BY) 4.0 International | Undefined
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Edits to 'https://fairsharing.org/FAIRsharing.4g5qcw' by 'The FAIRsharing Team' at 14:00, 14 Nov 2017 (approved):

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		Before: http://www.cropontology.org/rdf/
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Support

General

support email	Reinhard Simon
support email	Crop Ontology Helpdesk
forum	Crop Ontology Forum
help	Video Tutorials

Additional Information

Contact

Vilma Hualla Mamani ORCID

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons Attribution 4.0 International (CC BY 4.0)

Data Release

Download OBO Format	http://www.cropontology.org/obo/CO_331
Download RDF	http://www.cropontology.org/ontology/CO_331/Sweet%20Potato/nt

Data Curation

Annotation tool	http://www.cropontology.org/annotation-tool
Add new terms	http://www.cropontology.org/add-ontology

Data Access

AgroPortal: Browse / Download	https://doi.org/10.25504/FAIRsharing.4g5qcw
Browse	http://www.cropontology.org/ontology/CO_331/Sweet%20Potato

REST Web Services

Crop Ontology API

http://www.cropontology.org/api

Publications

The Sweetpotato Ontology

Vilma Rocio Hualla, Reinhard Simon, Robert Mwanga, Henry Saul Juarez Soto, Genoveva Rossel Montesinos
Proc. Int’l Conf. on Dublin Core and Metadata Applications 2015 2015

Link to Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Implementing Databases (3)

Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.

AgroPortal
The AgroPortal project reuses the biomedical domain’s semantic tools and insights to serve agronomy, but also food, plant, agriculture and biodiversity sciences. We offer a portal that features ontology hosting, search, versioning, visualization, comment, and recommendation; enables semantic annotation; stores and exploits ontology alignments; and enables interoperation with the semantic web. The AgroPortal specifically satisfies requirements of the agronomy community in terms of ontology formats (e.g., SKOS vocabularies and trait dictionaries) and supported features (offering detailed metadata and advanced annotation capabilities). The AgroPortal content is automatically retrieved by FAIRsharing.org (https://fairsharing.org/) and the Agrisemantics Map of Data Standards (http://vest.agrisemantics.org/).

SweetPotatoBase
SweetPotatoBase is a breeding database designed for advanced breeding methods for sweet potato crops.

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

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Maintains

International Potato Center (CIP), Peru (Research institute)

Sweet Potato Ontology

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