standards > terminology artifact > DOI:10.25504/FAIRsharing.4qyf0f


ready Regulation of Transcription Ontolology

Abbreviation: ReTO


General Information
An application ontology for the domain of gene transcription regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI and orthological properties from RO and SIO.



How to cite this record FAIRsharing.org: ReTO; Regulation of Transcription Ontolology; DOI: https://doi.org/10.25504/FAIRsharing.4qyf0f; Last edited: Aug. 12, 2019, 3:34 p.m.; Last accessed: Mar 28 2020 5:08 p.m.


This record is maintained by MKuiper  ORCID

Record updated: May 4, 2019, 9:14 a.m. by The FAIRsharing Team.

Show edit history



Support

No support information provided.

Additional Information

External Links


Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use





Publications

No publications available


RETO Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.


Related Standards

Reporting Guidelines

No guidelines defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (2)
IntAct molecular interaction database
IntAct provides a freely available, open source database system and analysis tools for protein interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.

Gene Ontology Annotation Database
The GO Annotation Database (GOA) provides Gene Ontology (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB), RNA molecules from RNACentral and protein complexes from the Complex Portal. GOA files contain a mixture of manual annotation supplied by members of the Gene Onotology Consortium and computationally assigned GO terms describing gene products. Annotation type is clearly indicated by associated evidence codes and there are links to the source data.

Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Maintains