databases > DOI:10.25504/FAIRsharing.5y3gdd

ready Pathway Commons

Abbreviation:PC

General Information
Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases. Information is sourced from public pathway databases and is readily searched, visualized, and downloaded. The data is freely available under the license terms of each contributing database.

Homepage http://www.pathwaycommons.org

Countries that developed this resource Canada , United States

Created in 2009

Taxonomic range

Knowledge Domains 





How to cite this record FAIRsharing.org: PC; Pathway Commons; DOI: https://doi.org/10.25504/FAIRsharing.5y3gdd; Last edited: Jan. 8, 2019, 1:18 p.m.; Last accessed: Nov 29 2020 10:11 a.m.


This record is maintained by garybader  ORCID  and IgorRodchenkov  (rodche)

Record updated: Jan. 12, 2018, 1:42 p.m. by The FAIRsharing Team.



In Collections
Systems Medicine
Open Science Prize

Support

General

FAQ http://www.pathwaycommons.org/#faq
forum https://groups.google.com/forum/#!forum/ ...
Mailing List None
twitter @PathwayCommons

Additional Information

Contact Gary Bader


Access / Retrieve Data

Conditions of Use

Applies to: Data use
  • Publicly available data

Data Access

Download http://www.pathwaycommons.org/archives/

REST Web Services

PC2 web services (BioPAX db) http://www.pathwaycommons.org/pc2/
Old PC portal and web services http://www.pathwaycommons.org/pc/

Other Web Services

PC2 SPARQL endpoint http://rdf.pathwaycommons.org/sparql/
PC2 faceted browser (FCT, RDF) http://rdf.pathwaycommons.org/fct/


Publications

Pathway Commons, a web resource for biological pathway data.

Cerami EG., Gross BE., Demir E., Rodchenkov I., Babur O., Anwar N., Schultz N., Bader GD., Sander C.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Maintains

Grant Number(s)

  • 1T32 GM083937 (National Institute of General Medical Sciences (NIGMS), Bethesda, MD, USA)

  • 2R01GM070743-06 (National Institute of General Medical Sciences (NIGMS), Bethesda, MD, USA)

  • P41HG004118 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)