databases > DOI:10.25504/FAIRsharing.65dmtr

ready EcoCyc E. coli Database

Abbreviation:EcoCyc

General Information
EcoCyc is a model organism database built on the genome sequence of Escherichia coli K-12 MG1655. Expert manual curation of the functions of individual E. coli gene products in EcoCyc has been based on information found in the experimental literature for E. coli K-12-derived strains. Updates to EcoCyc content continue to improve the comprehensive picture of E. coli biology. The utility of EcoCyc is enhanced by new tools available on the EcoCyc web site, and the development of EcoCyc as a teaching tool is increasing the impact of the knowledge collected in EcoCyc.

Homepage https://ecocyc.org/

Countries that developed this resource United States

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How to cite this record FAIRsharing.org: EcoCyc; EcoCyc E. coli Database; DOI: https://doi.org/10.25504/FAIRsharing.65dmtr; Last edited: Jan. 8, 2019, 1:19 p.m.; Last accessed: Sep 17 2019 1:54 p.m.


Record updated: Jan. 11, 2018, 12:08 p.m. by The FAIRsharing Team.

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Support

General

help EcoCyc User Guide

Additional Information

Contact biocyc-support@ai.sri.com


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Conditions of Use

Applies to: Data use




Publications

EcoCyc: fusing model organism databases with systems biology.

Keseler IM., Mackie A., Peralta-Gil M., Santos-Zavaleta A., Gama-Castro S., Bonavides-Martínez C., Fulcher C., Huerta AM., Kothari A., Krummenacker M., Latendresse M., Muñiz-Rascado L., Ong Q., Paley S., Schröder I., Shearer AG., Subhraveti P., Travers M., Weerasinghe D., Weiss V., Collado-Vides J., Gunsalus RP., Paulsen I., Karp PD.,
Nucleic Acids Res. 2013

View Paper (PubMed)

The EcoCyc Database.

Karp PD,Weaver D,Paley S,Fulcher C,Kubo A,Kothari A,Krummenacker M,Subhraveti P,Weerasinghe D,Gama-Castro S,Huerta AM,Muniz-Rascado L,Bonavides-Martinez C,Weiss V,Peralta-Gil M,Santos-Zavaleta A,Schroder I,Mackie A,Gunsalus R,Collado-Vides J,Keseler IM,Paulsen I
EcoSal Plus 2014

View Paper (PubMed) View Publication

The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.

Keseler IM,Mackie A,Santos-Zavaleta A,Billington R,Bonavides-Martinez C,Caspi R,Fulcher C,Gama-Castro S,Kothari A,Krummenacker M,Latendresse M,Muniz-Rascado L,Ong Q,Paley S,Peralta-Gil M,Subhraveti P,Velazquez-Ramirez DA,Weaver D,Collado-Vides J,Paulsen I,Karp PD
Nucleic Acids Res 2016

View Paper (PubMed) View Publication

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