databases > DOI:10.25504/FAIRsharing.65tdnz

ready Progenetix - genomic copy number aberrations in cancer

Abbreviation:Progenetix

General Information
The Progenetix database provides an overview of copy number abnormalities in human cancer from Comparative Genomic Hybridization (CGH) experiments. With 30817 cases from 1016 publications (Oct 2013), Progenetix is the largest curated database for whole genome CGH profiles. The current dataset contains 20621 chromosomal CGH and 10302 profiles from genomic array experiments. This data covers 365 diagnostic entities according to the International Classification of Disease in Oncology (ICD-O 3). Additionally, the website attempts to lists all publications referring to cancer genome profiling experiments.

Homepage http://www.progenetix.org

Developed in Switzerland

Created in 2001

Taxonomic range






How to cite this record FAIRsharing.org: Progenetix; Progenetix - genomic copy number aberrations in cancer; DOI: https://doi.org/10.25504/FAIRsharing.65tdnz; Last edited: Feb. 22, 2018, 2:57 p.m.; Last accessed: Sep 26 2018 4:08 a.m.


This record is maintained by mbaudis  ORCID

Record updated: Sept. 18, 2016, 3:53 p.m. by The FAIRsharing Team.



Support

General

help http://www.progenetix.org/Wiki/Progeneti ...
help @progenetix
online documentation http://www.progenetix.org/cgi-bin/reader ...

Additional Information

Contact Michael Baudis   ORCID
Identifiers.org MIR:00000600

Tools

    No tools defined




Publications

Genomic imbalances in 5918 malignant epithelial tumors: an explorative meta-analysis of chromosomal CGH data

Baudis M
BMC Cancer. 2007 Dec 18;7:226. 2007

View Paper (PubMed) View Publication

Online database and bioinformatics toolbox to support data mining in cancer cytogenetics.

Baudis M
Biotechniques. 2006 Mar;40(3):269-70, 272. 2006

View Paper (PubMed) View Publication

Progenetix.net: an online repository for molecular cytogenetic aberration data.

Baudis M, Cleary ML.
Bioinformatics. 2001 Dec;17(12):1228-9. 2001

View Paper (PubMed) View Publication

Progenetix: 12 years of oncogenomic data curation.

Cai H,Kumar N,Ai N,Gupta S,Rath P,Baudis M
Nucleic Acids Res 2013

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Maintains