databases > DOI:10.25504/FAIRsharing.675y92
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ready OrtholugeDB

General Information
OrtholugeDB contains Ortholuge-based orthology predictions for completely sequenced bacterial and archaeal genomes. It is also a resource for reciprocal best BLAST-based ortholog predictions, in-paralog predictions (recently duplicated genes) and ortholog groups in Bacteria and Archaea. The Ortholuge method improves the specificity of high-throughput orthology prediction.

Homepage http://www.pathogenomics.sfu.ca/ortholugedb

Countries that developed this resource Canada

Created in 2012

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How to cite this record FAIRsharing.org: OrtholugeDB; OrtholugeDB; DOI: https://doi.org/10.25504/FAIRsharing.675y92; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Aug 10 2020 9 a.m.


Record updated: Dec. 4, 2016, 10:43 p.m. by The FAIRsharing Team.

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FAQ http://www.pathogenomics.sfu.ca/ortholug ...

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Publications

Improving the specificity of high-throughput ortholog prediction.

Fulton DL., Li YY., Laird MR., Horsman BG., Roche FM., Brinkman FS.,
BMC Bioinformatics 2006

View Paper (PubMed)

OrtholugeDB: a bacterial and archaeal orthology resource for improved comparative genomic analysis.

Whiteside MD,Winsor GL,Laird MR,Brinkman FS
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

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