standards > terminology artifact > DOI:10.25504/FAIRsharing.6mmbzs


ready Protein-ligand interaction ontology

Abbreviation: PLIO


General Information
The protein--ligand interaction ontology (PLIO) was developed around three main concepts, namely target, ligand and interaction, and was enriched by adding synonyms, useful annotations and references. PLIO represents knowledge about the interaction of proteins and ligands (including drugs) and has a different scope and conceptual resolution than, for example, the molecular interaction ontology. An important feature of PLIO is that it links directly from an ontology framework describing protein–ligand interactions to the mathematical formulas relevant for the computation of some of the entities represented in the ontology.

Homepage https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads.html

Countries that developed this resource Germany

Created in 2011

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How to cite this record FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Dec 13 2019 9:18 p.m.


Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: June 21, 2018, 1:52 p.m. by The FAIRsharing Team.

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Additional Information

Contact Dr. Erfan Younesi

External Links

Bioportal http://bioportal.bioontology.org/ontologies/PLIO

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Data Access

Download https://www.scai.fraunhofer.de/content/dam/scai/de/downloads/bioinform ...



Publications

PLIO: an ontology for formal description of protein-ligand interactions.

Ivchenko O,Younesi E,Shahid M,Wolf A,Muller B,Hofmann-Apitius M
Bioinformatics 2011

View Paper (PubMed) View Publication

PLIO Ontology Display

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Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.


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