standards > terminology artifact > DOI:10.25504/FAIRsharing.6yNXYK


ready Plant Experimental Condition Ontology

Abbreviation: PECO


General Information
PECO is a structured, controlled vocabulary for the representation of plant experimental conditions. It describes the treatments, growing conditions, and/or study types used in various types of plant biology experiments.


This record replaces or incorporates the following deprecated resources:

Homepage https://github.com/Planteome/plant-experimental-conditions-ontology

Countries that developed this resource United States

Created in 2013

Taxonomic range

Subjects 

User-defined Tags





How to cite this record FAIRsharing.org: PECO; Plant Experimental Condition Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6yNXYK; Last edited: Feb. 7, 2021, 7:57 p.m.; Last accessed: Apr 18 2021 6:05 p.m.


This record is maintained by cooperl09

Record added: Feb. 14, 2019, 1:28 p.m.
Record updated: Feb. 6, 2021, 10:04 a.m. by The FAIRsharing Team.

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Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

Browse Ontology (Planteome) http://browser.planteome.org/amigo/term/PECO:0007359
Browse Ontoloty (OLS) https://www.ebi.ac.uk/ols/ontologies/peco
Browse Ontology (Ontobee) http://www.ontobee.org/ontology/PECO
AgroPortal: Browse / Download http://agroportal.lirmm.fr/ontologies/PECO



Publications

The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.

Cooper L,Meier A,Laporte MA,Elser JL,Mungall C,Sinn BT,Cavaliere D,Carbon S,Dunn NA,Smith B,Qu B,Preece J,Zhang E,Todorovic S,Gkoutos G,Doonan JH,Stevenson DW,Arnaud E,Jaiswal P
Nucleic Acids Res 2017

View Paper (PubMed) View Publication

PECO Ontology Display

View in BioPortal.


Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

View in OBO Foundry.



Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases (2)
Planteome
A resource providing data on bioentities and their associated ontology terms for Plant Biology. The database provides access to ontology-based annotations of genes, phenotypes and germplasms from about 90 plant species. A number of internal and external ontologies are used to annotate the biological data available from this resource.
DES-TOMATO
DES-TOMATO is a topic-specific literature exploration system developed to allow the exploration of information related to tomato. The information provided in DES-TOMATO is obtained through the text-mining of available scientific literature, namely full-length articles in PubMed Central and titles and abstracts in PubMed.

Implementing Policies

This record is not implemented by any policy.