PhylomeDB
Homepage http://phylomedb.org
Countries that developed this resource Spain
Created in 2007
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: PhylomeDB; PhylomeDB; DOI: https://doi.org/10.25504/FAIRsharing.7hxxc4; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 17 2021 12:43 a.m.
Record updated: Sept. 29, 2016, 11:37 a.m. by The FAIRsharing Team.
FAQ | http://phylomedb.org/?q=faq |
help | http://phylomedb.org/?q=help |
@phylomedb |
Additional Information
Contact | Toni Gabaldon |
search | http://phylomedb.org |
browse | http://phylomedb.org/?q=phylomes |
Blast | http://phylomedb.org/?q=blast_search |
Conditions of Use
Applies to: Data use- Publicly available data
Data Access
Download | ftp://phylomedb.org/phylomedb/ |
PhylomeDB: a database for genome-wide collections of gene phylogenies.
Huerta-Cepas J., Bueno A., Dopazo J., Gabaldón T.,
Nucleic Acids Res. 2008
PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions.
Huerta-Cepas J, Capella-Gutierrez S, Pryszcz LP, Denisov I, Kormes D, Marcet-Houben M, Gabaldón T. - See more at: http://www.biosharing.org/biodbcore-000611#sthash.SMMBBe07.dpuf
Nucleic Acids Res. 2010
PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.
Huerta-Cepas J,Capella-Gutierrez S,Pryszcz LP,Marcet-Houben M,Gabaldon T
Nucleic Acids Res 2013
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
No related databases defined
This record is not implemented by any policy.
Record Maintainer
This record is maintained by jhcepas and LaiaCarrete
Funds
Spanish Ministry of Economy and Competitiveness (MINECO) (Government body)
The European Research Council (ERC) (Government body)
Maintains
Comparative Genomics Group (CRG), Spain (Research institute)
Grant Number(s)
BIO2012-37161 (Spanish Ministry of Economy and Competitiveness (MINECO))
ERC-2012-StG-310325 (The European Research Council (ERC))
FP/2007-2013/ERC (The European Research Council (ERC))
NPRP 5-298-3-086 (Qatar National Research Fund)