databases > DOI:10.25504/FAIRsharing.7q4gsz

ready Protein Interaction Network Analysis

Abbreviation:PINA

General Information
The Protein Interaction Network Analysis (PINA)- is an integrated platform for protein interaction network construction, filtering, analysis, visualization and management. It integrates protein-protein interaction data from six public curated databases and builds a complete, non-redundant protein interaction dataset for six model organisms.

Homepage http://omics.bjcancer.org/pina/

Countries that developed this resource Australia , Finland

Created in 2006

Subjects 





How to cite this record FAIRsharing.org: PINA; Protein Interaction Network Analysis; DOI: https://doi.org/10.25504/FAIRsharing.7q4gsz; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Oct 28 2020 8:17 a.m.


Record updated: Jan. 11, 2018, 8:38 p.m. by The FAIRsharing Team.

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Support

General

FAQ http://omics.bjcancer.org/pina/interacto ...
training Tutorial

Additional Information

Contact Jianmin Wu

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Versioning

versioning by date No link recorded
access to historical files available No link recorded

Data Release

quarterly release No link recorded

Data Curation

manual curation of protein-protein interaction No link recorded
computational prediction of interactome modules No link recorded

Data Access

file download(XML,tab-delimited) No link recorded
web service No link recorded
web interface No link recorded



Publications

Integrated network analysis platform for protein-protein interactions.

Wu J., Vallenius T., Ovaska K., Westermarck J., Mäkelä TP., Hautaniemi S.,
Nat. Methods 2009

View Paper (PubMed)

PINA v2.0: mining interactome modules.

Cowley MJ,Pinese M,Kassahn KS,Waddell N,Pearson JV,Grimmond SM,Biankin AV,Hautaniemi S,Wu J
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

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Metrics

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Implementing Policies

This record is not implemented by any policy.


Credit

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Funds

Grant Number(s)

  • 125826 (Academy of Finland, Helsinki, Finland)

  • 631701 (National Health and Medical Research Council (NHMRC), Australia)

  • ICGC 09-01 (Cancer Council New South Wales, Sydney, Australia)

  • SRP11-01 (Cancer Council New South Wales, Sydney, Australia)