Edits to 'https://fairsharing.org/FAIRsharing.91yrz6' by 'The FAIRsharing Team' at 10:20, 25 Feb 2021 (approved):
'licences' has been modified:
Before:
Publicly available data||Data
After:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Added:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Removed:
Publicly available data||Data
Edits to 'https://fairsharing.org/FAIRsharing.91yrz6' by 'The FAIRsharing Team' at 10:19, 25 Feb 2021 (approved):
'user_defined_tags' has been modified:
Before:
After:
Extracellular matrix proteins
Added:
Extracellular matrix proteins
Removed:
'organizations' has been modified:
Before:
Fondation pour la Recherche M?dicale, Paris, France|https://www.frm.org/en|Funds
Institut de Chimie et Biochimie Mol?culaires et Supramol?culaires (ICBMS), Lyon, France|http://www.icbms.fr/|Maintains
Institut Fran?ais de Bioinformatique (IFB, French Institute of Bioinformatics), France|https://www.france-bioinformatique.fr/|Funds
Fondation pour la Recherche M?dicale|https://www.frm.org/en|Funds
After:
Institut Fran?ais de Bioinformatique (IFB, French Institute of Bioinformatics), France|https://www.france-bioinformatique.fr/|Funds
Fondation pour la Recherche M?dicale|https://www.frm.org/en|Funds
Institut de Chimie et Biochimie Mol?culaires et Supramol?culaires (ICBMS), Lyon, France|http://www.icbms.fr/|Maintains
Added:
Removed:
Fondation pour la Recherche M?dicale, Paris, France|https://www.frm.org/en|Funds
'onto_disciplines' has been modified:
Before:
Biology
Life Science
After:
Biology
Added:
Removed:
Life Science
'name' has been modified:
Before: MatrixDB: Extracellular Matrix Interaction Database
After: Extracellular Matrix Interaction Database
'dataProcesses' has been modified:
Before:
Advanced Search, data access, http://matrixdb.univ-lyon1.fr/queries.html
After:
Advanced Search, data access, http://matrixdb.univ-lyon1.fr/queries.html
Download Core (PSI-MI Tab), data release, http://matrixdb.univ-lyon1.fr/download/matrixdb_CORE.tab.gz
Download IMEx Extended (PSI-MI Tab), data release, http://matrixdb.univ-lyon1.fr/download/matrixdb_FULL.tab.gz
Added:
Download Core (PSI-MI Tab), data release, http://matrixdb.univ-lyon1.fr/download/matrixdb_CORE.tab.gz
Download IMEx Extended (PSI-MI Tab), data release, http://matrixdb.univ-lyon1.fr/download/matrixdb_FULL.tab.gz
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.91yrz6' by 'The FAIRsharing Team' at 13:27, 02 Jul 2019 (approved):
'organizations' has been modified:
Before:
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains
Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
After:
Fondation pour la Recherche Mdicale, Paris, France|https://www.frm.org/en|Funds
Institut de Chimie et Biochimie Molculaires et Supramolculaires (ICBMS), Lyon, France|http://www.icbms.fr/|Maintains
Institut Franais de Bioinformatique (IFB, French Institute of Bioinformatics), France|https://www.france-bioinformatique.fr/|Funds
Fondation pour la Recherche Mdicale|https://www.frm.org/en|Funds
Added:
Fondation pour la Recherche Mdicale, Paris, France|https://www.frm.org/en|Funds
Institut de Chimie et Biochimie Molculaires et Supramolculaires (ICBMS), Lyon, France|http://www.icbms.fr/|Maintains
Institut Franais de Bioinformatique (IFB, French Institute of Bioinformatics), France|https://www.france-bioinformatique.fr/|Funds
Fondation pour la Recherche Mdicale|https://www.frm.org/en|Funds
Removed:
Institut de Biologie et Chimie des Proteines (IBCP), Centre National de la Recherche Scientifique, Lyon, France|http://www.ibcp.fr/,lang=fr|Maintains
Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
'standardsImplemented' has been modified:
Before:
Gene Ontology
Molecular Interaction Tabular
Minimum Information about a Molecular Interaction Experiment
Chemical Entities of Biological Interest
Molecular Interaction eXtensible Markup Language
After:
Chemical Entities of Biological Interest
Gene Ontology
Molecular Interaction Tabular
Molecular Interaction eXtensible Markup Language
Minimum Information about a Molecular Interaction Experiment
PSI Molecular Interaction Controlled Vocabulary
Added:
PSI Molecular Interaction Controlled Vocabulary
Removed:
'supportLinks' has been modified:
Before:
training|https://www.youtube.com/watch?list=PLw61Ua8TujDRLFSZMZChqmqX7yFBYLaz0&v=BCHp12lefK4
After:
help|http://matrixdb.univ-lyon1.fr/data/Tutorial_MatrixDB_v3.pdf
training|https://www.youtube.com/watch?list=PLw61Ua8TujDRLFSZMZChqmqX7yFBYLaz0&v=BCHp12lefK4
Added:
help|http://matrixdb.univ-lyon1.fr/data/Tutorial_MatrixDB_v3.pdf
Removed:
'name' has been modified:
Before: MatrixDB: Extracellular Matrix interactions database
After: MatrixDB: Extracellular Matrix Interaction Database
'onto_disciplines' has been modified:
Before:
Life Sciences
After:
Biology
Life Sciences
Added:
Biology
Removed:
'grants' has been modified:
Before:
After:
DBI20141231336
Added:
DBI20141231336
Removed:
'publications' has been modified:
Before:
MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions.|Chautard E., Ballut L., Thierry-Mieg N., Ricard-Blum S., |Bioinformatics|2009
MatrixDB, the extracellular matrix interaction database: updated content, a new navigator and expanded functionalities.|Launay G,Salza R,Multedo D,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2014
MatrixDB, the extracellular matrix interaction database.|Chautard E,Fatoux-Ardore M,Ballut L,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2010
After:
MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions.|Chautard E., Ballut L., Thierry-Mieg N., Ricard-Blum S., |Bioinformatics|2009
MatrixDB, the extracellular matrix interaction database: updated content, a new navigator and expanded functionalities.|Launay G,Salza R,Multedo D,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2014
MatrixDB, the extracellular matrix interaction database.|Chautard E,Fatoux-Ardore M,Ballut L,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2010
MatrixDB: integration of new data with a focus on glycosaminoglycan interactions.|Clerc O,Deniaud M,Vallet SD,Naba A,Rivet A,Perez S,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2018
Added:
MatrixDB: integration of new data with a focus on glycosaminoglycan interactions.|Clerc O,Deniaud M,Vallet SD,Naba A,Rivet A,Perez S,Thierry-Mieg N,Ricard-Blum S|Nucleic Acids Res|2018
Removed:
'description' has been modified:
Before: MatrixDB is a database reporting mammalian protein-protein and protein-carbohydrate interactions involving extracellular molecules. Interactions with lipids and cations are also reported. Full-length molecules, fragments and multimers present in the extracellular matrix are all included in the database.
After: MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations.
MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.
Edits to 'https://fairsharing.org/FAIRsharing.91yrz6' by 'The FAIRsharing Team' at 19:32, 11 Jan 2018 (approved):
'domains' has been modified:
Before:
Life Science|domain|http://www.fairsharing.org/ontology/SRAO_0000069
Molecular interactions|pathways and networks||http://edamontology.org/topic_0602
Protein|None|http://purl.obolibrary.org/obo/PR_000000001
Small molecule|material|http://purl.obolibrary.org/obo/MI_0328
After:
Life Science|domain|http://www.fairsharing.org/ontology/SRAO_0000069
Protein|None|http://purl.obolibrary.org/obo/PR_000000001
Small molecule|material|http://purl.obolibrary.org/obo/MI_0328
Protein interactions||http://edamontology.org/topic_0128
Carbohydrate||http://purl.obolibrary.org/obo/CHEBI_16646
Molecular interaction|process|http://purl.obolibrary.org/obo/MI_0000
Lipid|None|http://purl.obolibrary.org/obo/CHEBI_18059
Added:
Protein interactions||http://edamontology.org/topic_0128
Carbohydrate||http://purl.obolibrary.org/obo/CHEBI_16646
Molecular interaction|process|http://purl.obolibrary.org/obo/MI_0000
Lipid|None|http://purl.obolibrary.org/obo/CHEBI_18059
Removed:
Molecular interactions|pathways and networks||http://edamontology.org/topic_0602