databases > DOI:10.25504/FAIRsharing.923a0p

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ready Ensembl Genomes

General Information
The Ensembl genome annotation system, developed jointly by the EBI and the Wellcome Trust Sanger Institute, has been used for the annotation, analysis and display of vertebrate genomes since 2000. Since 2009, the Ensembl site has been complemented by the creation of five new sites, for bacteria, protists, fungi, plants and invertebrate metazoa, enabling users to use a single collection of (interactive and programatic) interfaces for accessing and comparing genome-scale data from species of scientific interest from across the taxonomy.

Homepage http://ensemblgenomes.org/

Developed in European Union , United Kingdom

Created in 2008






How to cite this record FAIRsharing.org: Ensembl Genomes; Ensembl Genomes; DOI: https://doi.org/10.25504/FAIRsharing.923a0p; Last edited: Aug. 6, 2018, 2:17 p.m.; Last accessed: Oct 19 2018 10:26 a.m.


This record is maintained by pkersey

Record added: March 13, 2017, 2:17 p.m.
Record updated: Aug. 6, 2018, 2:17 p.m. by The FAIRsharing Team.

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In Collections
ELIXIR node contributed resources



Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Data release No link recorded

Data Access

browse http://ensemblgenomes.org/info/genomes
download http://ensemblgenomes.org/info/access/ftp
MySQL database access http://ensemblgenomes.org/info/access/mysql

REST Web Services

REST service http://ensemblgenomes.org/info/access/rest

Other Web Services

Ensembl Perl API http://ensemblgenomes.org/info/access/api


Publications

Ensembl Genomes 2016: more genomes, more complexity.

Kersey PJ,Allen JE,Armean I,Boddu S,Bolt BJ,Carvalho-Silva D,Christensen M,Davis P,Falin LJ,Grabmueller C,Humphrey J,Kerhornou A,Khobova J,Aranganathan NK,Langridge N,Lowy E,McDowall MD,Maheswari U,Nuhn M,Ong CK,Overduin B,Paulini M,Pedro H,Perry E,Spudich G,Tapanari E,Walts B,Williams G,Tello-Ruiz M,Stein J,Wei S,Ware D,Bolser DM,Howe KL,Kulesha E,Lawson D,Maslen G,Staines DM
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

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Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is maintained by pkersey

Funds

Undefined

Grant Number(s)

  • 090548/B/09/Z (The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.)

  • 222886-2, Microme (European Commission FP7)

  • 228421, INFRAVEC (European Commission FP7)

  • 284496, transPLANT (European Commission FP7)

  • 41686 IPGA Gramene (U.S. National Science Foundation)

  • 42660, AllBio (European Commission FP7)

  • BB/F19793/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/H531519/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/I008071/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/J00328X/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/J017299/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/KK020102/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/M018458/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • OPPGD1491 (Bill and Melinda Gates Foundation, Seattle, Washington, United States)