standards > model/format > DOI:10.25504/FAIRsharing.975659


ready PRIDE XML Format


General Information
XML submission format for the PRIDE repository at the EBI.



How to cite this record FAIRsharing.org: PRIDE XML Format; PRIDE XML Format; DOI: https://doi.org/10.25504/FAIRsharing.975659; Last edited: Feb. 13, 2019, 11:02 a.m.; Last accessed: Aug 18 2019 8:37 p.m.


This record is maintained by javizca  ORCID

Record updated: Feb. 13, 2019, 11:02 a.m. by The FAIRsharing Team.

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Additional Information



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Publications

2016 update of the PRIDE database and its related tools.

Vizcaino JA,Csordas A,del-Toro N,Dianes JA,Griss J,Lavidas I,Mayer G,Perez-Riverol Y,Reisinger F,Ternent T,Xu QW,Wang R,Hermjakob H
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

ProteomeXchange provides globally coordinated proteomics data submission and dissemination.

Vizcaino JA,Deutsch EW,Wang R,Csordas A,Reisinger F,Rios D,Dianes JA,Sun Z,Farrah T,Bandeira N,Binz PA,Xenarios I,Eisenacher M,Mayer G,Gatto L,Campos A,Chalkley RJ,Kraus HJ,Albar JP,Martinez-Bartolome S,Apweiler R,Omenn GS,Martens L,Jones AR,Hermjakob H
Nat Biotechnol 2014

View Paper (PubMed) View Publication

How to submit MS proteomics data to ProteomeXchange via the PRIDE database.

Ternent T,Csordas A,Qi D,Gomez-Baena G,Beynon RJ,Jones AR,Hermjakob H,Vizcaino JA
Proteomics 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

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Identifier Schemas

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Metrics

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Implementing Databases (2)
PRoteomics IDEntifications database
The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence.

ProteomeXchange
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.

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This record is not implemented by any policy.


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Grant Number(s)

  • BB/I00095X/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/K01997X/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • BB/L024225/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • WT101477MA (The Wellcome Trust, UK)