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Enzyme Structure Function Ontology

Abbreviation: ESFO

General Information

The ESFO provides a new paradigm for organizing enzyme sequence, structure, and function information, whereby specific elements of enzyme sequence and structure are mapped to specific conserved aspects of function, thus facilitating the functional annotation of uncharacterized enzymes. The ESFO helps prevent misannotation by emphasizing annotation of enzymes only at the level of functional granularity warranted by available information.

Homepage http://sfld.rbvi.ucsf.edu/

No country information defined

Created in 2016

Taxonomic range

All

Knowledge Domains BETA

Subjects BETA

How to cite this record FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Jan. 8, 2019, 1:38 p.m.; Last accessed: Jan 24 2019 10:34 a.m.

Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: Nov. 21, 2018, 10:43 a.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.9y3gv0' by 'The FAIRsharing Team' at 10:43, 21 Nov 2018 (not approved):

	'domains' has been modified:
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			Annotation
			Enzyme
			Sequence alignment
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			Annotation
			DNA sequence data
			Enzyme
			Life Science
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			DNA sequence data
			Life Science
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	'miriam_id' has been modified:
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Edits to 'https://fairsharing.org/FAIRsharing.9y3gv0' by 'The FAIRsharing Team' at 21:56, 05 Aug 2018 (not approved):

	'domains' has been modified:
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		After:
			Annotation
			DNA sequence
			Enzyme
			Sequence alignment
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			Annotation
			DNA sequence
			Enzyme
			Sequence alignment
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			training|http://sfld.rbvi.ucsf.edu/django/web/tutorial_links/
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			training|http://sfld.rbvi.ucsf.edu/django/web/tutorial_links/
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Support

General

training

Tutorials

Additional Information

Contact

Shoshana Brown

External Links

Bioportal

http://bioportal.bioontology.org/ontologies/ESFO

Tools

No tools defined

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Publications

No publications available

ESFO Ontology Display

View in BioPortal.

Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Implementing Databases (1)

Sequence Function Linkage Database
Structure Function Linkage Database (SFLD) is a database of enzymes classified by linking sequences to chemical function. A heirachical systems is used to classify enzymes by family or superfamily other category levels include functional domain, subgroup and suprafamily.

Implementing Policies

This record is not implemented by any policy.

Credit

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Enzyme Structure Function Ontology

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