Record added: Dec. 4, 2019, 8:11 a.m.
Record updated: Dec. 18, 2019, 10:42 a.m. by Chanaka.

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 10:42, 18 Dec 2019 (approved):

	'description' has been modified:
		Before: The Plant Genome Integrative Explorer is a collection of interoperable web resources for searching, visualising and analysing genomics and transcriptomics data for different plant species. Currently, it includes dedicated web portals for enabling in-depth exploration of Poplar, Eucalyptus Norway spruce, and Arabidopsis. The PlantGenIE platform uses Chado databases and is based on the GenIE-Sys ( Genome Integrative Explorer System). Within PlantGenIE are four systems, each dedicated to a different species (PopGenIE, ConGenIE, AtGenIE and EucGenIE).
		After: The Plant Genome Integrative Explorer is a collection of interoperable web resources for searching, visualising and analysing genomics and transcriptomics data for different plant species. Currently, it includes dedicated web portals for enabling in-depth exploration of Poplar, Eucalyptus Norway spruce, and Arabidopsis and few more plant species. The PlantGenIE platform is based on the GenIE-Sys ( Genome Integrative Explorer System). 

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'The FAIRsharing Team' at 09:42, 05 Dec 2019 (approved):

	'description' has been modified:
		Before: The Plant Genome Integrative Explorer is a collection of interoperable web resources for searching, visualising and analysing genomics and transcriptomics data for different plant species. Currently, it includes dedicated web portals for enabling in-depth exploration of Poplar, Eucalyptus Norway spruce, and Arabidopsis. The PlantGenIE platform uses Chado databases and is based on the GenIE-Sys ( Genome Integrative Explorer System).
		After: The Plant Genome Integrative Explorer is a collection of interoperable web resources for searching, visualising and analysing genomics and transcriptomics data for different plant species. Currently, it includes dedicated web portals for enabling in-depth exploration of Poplar, Eucalyptus Norway spruce, and Arabidopsis. The PlantGenIE platform uses Chado databases and is based on the GenIE-Sys ( Genome Integrative Explorer System). Within PlantGenIE are four systems, each dedicated to a different species (PopGenIE, ConGenIE, AtGenIE and EucGenIE).

	'dataProcesses' has been modified:
		Before:
			Sequence Search
			Community Annotation
			Download (FTP)
		After:
			Sequence Search
			Community Annotation
			Download (FTP)
			PopGenIE
			AtGenIE
			ConGenIE
			EucGenIE
		Added:
			PopGenIE
			AtGenIE
			ConGenIE
			EucGenIE
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 09:25, 04 Dec 2019 (approved):

	'supportLinks' has been modified:
		Before:
			email|contact@plantgenie.org
			help|http://congenie.org/help
		After:
			email|contact@plantgenie.org
			help|https://plantgenie.org/help/tool_id/blast/
		Added:
			help|https://plantgenie.org/help/tool_id/blast/
		Removed:
			help|http://congenie.org/help

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 09:21, 04 Dec 2019 (approved):

	'taxonomies' has been modified:
		Before:
			Picea abies
			Picea taeda
		After:
			Arabidopsis thaliana
			Eucalyptus grandis
			Picea abies
			Picea taeda
			Populus trichocarpa
		Added:
			Arabidopsis thaliana
			Eucalyptus grandis
			Populus trichocarpa
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'The FAIRsharing Team' at 09:13, 04 Dec 2019 (approved):

	'supportLinks' has been modified:
		Before:
			email|contact@plantgenie.org
		After:
			email|contact@plantgenie.org
			help|http://congenie.org/help
		Added:
			help|http://congenie.org/help
		Removed:

	'taxonomies' has been modified:
		Before:
			RNA-Seq
		After:
			Picea abies
			Picea taeda
		Added:
			Picea abies
			Picea taeda
		Removed:
			RNA-Seq

	'tools' has been modified:
		Before:
		After:
			BLAST||http://congenie.org/blast
			Gene List||http://congenie.org/citation?genelist=enable
			GBrowse||http://congenie.org/gbrowse
			JBrowse||http://congenie.org/jbrowse
			Random Gene List||http://congenie.org/random_gene_list
			exImage||http://congenie.org/eximage
			exNet||http://congenie.org/exnet
			exPlot||http://congenie.org/explot
			exHeatmap||http://congenie.org/exheatmap
			Enrichment||http://congenie.org/enrichment
			ComPlEx||http://complex.plantgenie.org/
			Galaxy||http://galaxy.plantgenie.org:8080/
		Added:
			BLAST||http://congenie.org/blast
			Gene List||http://congenie.org/citation?genelist=enable
			GBrowse||http://congenie.org/gbrowse
			JBrowse||http://congenie.org/jbrowse
			Random Gene List||http://congenie.org/random_gene_list
			exImage||http://congenie.org/eximage
			exNet||http://congenie.org/exnet
			exPlot||http://congenie.org/explot
			exHeatmap||http://congenie.org/exheatmap
			Enrichment||http://congenie.org/enrichment
			ComPlEx||http://complex.plantgenie.org/
			Galaxy||http://galaxy.plantgenie.org:8080/
		Removed:

	'dataProcesses' has been modified:
		Before:
		After:
			Sequence Search
			Community Annotation
			Download (FTP)
		Added:
			Sequence Search
			Community Annotation
			Download (FTP)
		Removed:

	'onto_domains' has been modified:
		Before:
			Genome visualisation
			QTL
			RNA sequence
			Sequence alignment
			coexpression
			gene expression
		After:
			GO-term enrichment report
			Genome annotation
			Genome assembly
			Genome visualisation
			QTL
			RNA sequence
			RNA-seq assay
			Sequence alignment
			coexpression
			gene expression
			protein
		Added:
			GO-term enrichment report
			Genome annotation
			Genome assembly
			RNA-seq assay
			protein
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 08:43, 04 Dec 2019 (approved):

	'licences' has been modified:
		Before:
			Chanaka Mannapperuma|https://opensource.org/licenses/BSD-3-Clause|Data
		After:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data
		Added:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data
		Removed:
			Chanaka Mannapperuma|https://opensource.org/licenses/BSD-3-Clause|Data

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 08:35, 04 Dec 2019 (approved):

	'licences' has been modified:
		Before:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data
		After:
			Chanaka Mannapperuma|https://opensource.org/licenses/BSD-3-Clause|Data
		Added:
			Chanaka Mannapperuma|https://opensource.org/licenses/BSD-3-Clause|Data
		Removed:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data

	'organizations' has been modified:
		Before:
		After:
			Ume Plant Science Centre|https://upsc.se|Maintains
		Added:
			Ume Plant Science Centre|https://upsc.se|Maintains
		Removed:

	'taxonomies' has been modified:
		Before:
			Gene Expression
			Gene Ontology Enrichment
			Genome Annotation
			Genome Assembly
			RNA-Seq
			Visualisation
		After:
			Gene Expression
			Gene Ontology Enrichment
			Genome Annotation
			Genome Assembly
			Protein Analysis
			RNA-Seq
			Visualisation
		Added:
			Protein Analysis
		Removed:

	'onto_disciplines' has been modified:
		Before:
		After:
			Bioinformatics
			Data Visualization
			Functional Genomics
			Genomics
			Life Science
			Phylogenetics
		Added:
			Bioinformatics
			Data Visualization
			Functional Genomics
			Genomics
			Life Science
			Phylogenetics
		Removed:

	'onto_domains' has been modified:
		Before:
		After:
			Genome visualisation
			QTL
			RNA sequence
			Sequence alignment
			coexpression
			gene expression
		Added:
			Genome visualisation
			QTL
			RNA sequence
			Sequence alignment
			coexpression
			gene expression
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 08:25, 04 Dec 2019 (approved):

	'licences' has been modified:
		Before:
		After:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data
		Added:
			BSD-3-Clause License (Modified BSD License) (New BSD License)|https://opensource.org/licenses/BSD-3-Clause|Data
		Removed:

	'supportLinks' has been modified:
		Before:
		After:
			email|contact@plantgenie.org
		Added:
			email|contact@plantgenie.org
		Removed:

	'taxonomies' has been modified:
		Before:
		After:
			Gene Expression
			Gene Ontology Enrichment
			Genome Annotation
			Genome Assembly
			RNA-Seq
			Visualisation
		Added:
			Gene Expression
			Gene Ontology Enrichment
			Genome Annotation
			Genome Assembly
			RNA-Seq
			Visualisation
		Removed:

	'tools' has been modified:
		Before:
			exImage|v1.0|https://eucgenie.org/eximage
		After:
		Added:
		Removed:
			exImage|v1.0|https://eucgenie.org/eximage

            

Edits to 'https://fairsharing.org/FAIRsharing.BnLUyq' by 'Chanaka' at 08:15, 04 Dec 2019 (approved):

	'accessPoints' has been modified:
		Before:
		After:
			REST|https://api.plantgenie.org|Pubic API to query PlantGenIE databases
		Added:
			REST|https://api.plantgenie.org|Pubic API to query PlantGenIE databases
		Removed:

	'tools' has been modified:
		Before:
		After:
			exImage|v1.0|https://eucgenie.org/eximage
		Added:
			exImage|v1.0|https://eucgenie.org/eximage
		Removed:

	'publications' has been modified:
		Before:
		After:
			The Plant Genome Integrative Explorer Resource: PlantGenIE.org.|Sundell D,Mannapperuma C,Netotea S,Delhomme N,Lin YC,Sjodin A,Van de Peer Y,Jansson S,Hvidsten TR,Street NR|New Phytol|2015
		Added:
			The Plant Genome Integrative Explorer Resource: PlantGenIE.org.|Sundell D,Mannapperuma C,Netotea S,Delhomme N,Lin YC,Sjodin A,Van de Peer Y,Jansson S,Hvidsten TR,Street NR|New Phytol|2015
		Removed: