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eLife Recommended Repositories and Standards

Abbreviation: eLife Data Policy

General Information

Homepage https://submit.elifesciences.org/html/elife_author_instructions.html#policies

Countries that developed this resource United Kingdom

Published in 2019

Type: Journal

Description:

This policy outlines the databases, repositories and standards recommended for author use by eLIFE. eLIFE is a signatory of the TOP guidelines, that promote shared standards for increasing openness, transparency, and reproducibility, and a member of the COPE committee on publication ethics.

Collections/recommendations derived from this policy:

This policy implements the recommendation eLife Recommended Repositories and Standards.

Taxonomic range

Not applicable

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: eLife Recommended Repositories and Standards; DOI: https://doi.org/10.25504/FAIRsharing.F0QmCP; Last edited: March 12, 2021, 3:14 p.m.; Last accessed: Sep 16 2021 10:48 p.m.

This record is maintained by wm.chan

Record added: April 26, 2019, 10:14 a.m. Record updated: Feb. 23, 2021, 11:06 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.F0QmCP' by 'The FAIRsharing Team' at 11:07, 23 Feb 2021 (approved):

	'contactEmail' has been modified:
		Before: 
		After: wm.chan@elifesciences.org

Edits to 'https://fairsharing.org/FAIRsharing.F0QmCP' by 'The FAIRsharing Team' at 09:58, 11 Nov 2019 (approved):

	'db_implementation' has been modified:
		Before:
			GenBank
			Crystallography Open Database
			DNA Data Bank of Japan
			FlyBase
			IntAct molecular interaction database
			The Arabidopsis Information Resource
			WormBase
			GenomeRNAi
			MetaboLights
			Influenza Research Database
			FlowRepository
			Addgene
			American Type Culture Collection database
			figshare
			ArrayExpress
			European Nucleotide Archive
			PRoteomics IDEntifications database
			The European Genome-phenome Archive
			HUGO Gene Nomenclature Committee
			Eukaryotic Pathogen Database Resources
			PeptideAtlas
			European Mouse Mutant Archive
			NeuroMorpho.Org
			Rat Genome Database
			Database of Single Nucleotide Polymorphism
			Gene Expression Omnibus
			Sequence Read Archive
			PubChem
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Dryad
			ClinicalTrials.gov
			National Addiction & HIV Data Archive Program (NAHDAP)
			PhysioNet
			National Database for Autism Research (NDAR)
			Biological General Repository for Interaction Datasets
			The Cancer Imaging Archive
			UniProt Knowledgebase
			Xenopus laevis and tropicalis biology and genomics resource
			Database of Interacting Proteins
			Knockout Mouse Project
			miRBase Sequence Database
			The Zebrafish Information Network
			Biological Magnetic Resonance Databank
			VectorBase
			Electron Microscopy Data Bank
			Integrated Taxonomic Information System
			ProteomeXchange
			MGnify
			Protein Circular Dichroism Data Bank
			OpenNeuro
			Coherent X-ray Imaging Data Bank
			 International Neuroimaging Data-Sharing Initiative
			European Variation Archive
			Experimental data repository for KInetic MOdels of biological SYStems
			PANGAEA - Data Publisher for Earth and Environmental Science
			Environmental Data Initiative Data Repository
			Global Biodiversity Information Facility
			NCBI Trace Archives
			Open Science Framework
			SICAS medical image repository
			MGI Mouse Gene Expression Database
			Worldwide Protein Data Bank
			PlasmID
			Seanoe
			STRENDA DB
			Image Data Resource
			Zenodo
			NOAA National Centres for Environmental Information
			Oak Ridge National Laboratory, Distributed Active Archive Centre for Biogeochemical Dynamics
			Harvard Dataverse
			World Data Center for Climate at DRKZ
			Australian Antarctic Data Centre
			High Energy Physics Data Repository
			SIMBAD Astronomical Database
			UK Solar System Data Centre Data Archive
			Qualitative Data Repository
			FAIRsharing
			G-Node Data Infrastructure Services
			Code Ocean
			GitHub
		After:
			GenBank
			Crystallography Open Database
			DNA Data Bank of Japan
			FlyBase
			IntAct molecular interaction database
			The Arabidopsis Information Resource
			WormBase
			GenomeRNAi
			MetaboLights
			Influenza Research Database
			FlowRepository
			Addgene
			American Type Culture Collection database
			figshare
			ArrayExpress
			European Nucleotide Archive
			PRoteomics IDEntifications database
			The European Genome-phenome Archive
			HUGO Gene Nomenclature Committee
			Eukaryotic Pathogen Database Resources
			PeptideAtlas
			European Mouse Mutant Archive
			NeuroMorpho.Org
			Rat Genome Database
			Database of Single Nucleotide Polymorphism
			Gene Expression Omnibus
			Sequence Read Archive
			PubChem
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Dryad
			ClinicalTrials.gov
			National Addiction & HIV Data Archive Program (NAHDAP)
			PhysioNet
			National Database for Autism Research (NDAR)
			Biological General Repository for Interaction Datasets
			The Cancer Imaging Archive
			UniProt Knowledgebase
			Xenopus laevis and tropicalis biology and genomics resource
			Database of Interacting Proteins
			Knockout Mouse Project
			miRBase Sequence Database
			The Zebrafish Information Network
			Biological Magnetic Resonance Databank
			VectorBase
			Giga Science Database
			Electron Microscopy Data Bank
			Integrated Taxonomic Information System
			ProteomeXchange
			MGnify
			Protein Circular Dichroism Data Bank
			OpenNeuro
			Coherent X-ray Imaging Data Bank
			 International Neuroimaging Data-Sharing Initiative
			European Variation Archive
			Experimental data repository for KInetic MOdels of biological SYStems
			PANGAEA - Data Publisher for Earth and Environmental Science
			Environmental Data Initiative Data Repository
			Global Biodiversity Information Facility
			NCBI Trace Archives
			Open Science Framework
			SICAS medical image repository
			MGI Mouse Gene Expression Database
			Worldwide Protein Data Bank
			PlasmID
			Seanoe
			STRENDA DB
			Image Data Resource
			Zenodo
			NOAA National Centres for Environmental Information
			Oak Ridge National Laboratory, Distributed Active Archive Centre for Biogeochemical Dynamics
			Harvard Dataverse
			World Data Center for Climate at DRKZ
			Australian Antarctic Data Centre
			High Energy Physics Data Repository
			SIMBAD Astronomical Database
			UK Solar System Data Centre Data Archive
			Qualitative Data Repository
			FAIRsharing
			G-Node Data Infrastructure Services
			Code Ocean
			GitHub
		Added:
			Giga Science Database
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.F0QmCP' by 'The FAIRsharing Team' at 15:56, 06 Jun 2019 (approved):

	'organizations' has been modified:
		Before:
		After:
			eLife Sciences Publications, Ltd|https://elifesciences.org/|Maintains
		Added:
			eLife Sciences Publications, Ltd|https://elifesciences.org/|Maintains
		Removed:

	'onto_disciplines' has been modified:
		Before:
		After:
			Life Sciences
		Added:
			Life Sciences
		Removed:

	'description' has been modified:
		Before: This policy outlines the databases, repositories and standards recommended for author use by eLIFE. eLIFE is a signatory of the TOP guidelines, that promote shared standards for increasing openness, transparency, and reproducibility,  and a member of the COPE committee, on publication ethics.
		After: This policy outlines the databases, repositories and standards recommended for author use by eLIFE. eLIFE is a signatory of the TOP guidelines, that promote shared standards for increasing openness, transparency, and reproducibility,  and a member of the COPE committee on publication ethics.

	'onto_domains' has been modified:
		Before:
		After:
			journal article
		Added:
			journal article
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.F0QmCP' by 'The FAIRsharing Team' at 15:42, 06 Jun 2019 (approved):

	'std_implementation' has been modified:
		Before:
			CONSOlidated standards of Reporting Trials
		After:
			CONSOlidated standards of Reporting Trials
			NCBI Taxonomy
		Added:
			NCBI Taxonomy
		Removed:

	'contact' has been modified:
		Before: 
		After: Wei Mun Chan

	'db_implementation' has been modified:
		Before:
			GenBank
			Crystallography Open Database
			DNA Data Bank of Japan
			Addgene
			American Type Culture Collection database
			ArrayExpress
			European Mouse Mutant Archive
			Database of Single Nucleotide Polymorphism
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Dryad
			ClinicalTrials.gov
			Biological General Repository for Interaction Datasets
			Database of Interacting Proteins
			Knockout Mouse Project
			Biological Magnetic Resonance Databank
			Coherent X-ray Imaging Data Bank
			Open Science Framework
			Worldwide Protein Data Bank
			PlasmID
			Harvard Dataverse
			Australian Antarctic Data Centre
			FAIRsharing
			Code Ocean
			GitHub
		After:
			GenBank
			Crystallography Open Database
			DNA Data Bank of Japan
			FlyBase
			IntAct molecular interaction database
			The Arabidopsis Information Resource
			WormBase
			GenomeRNAi
			MetaboLights
			Influenza Research Database
			FlowRepository
			Addgene
			American Type Culture Collection database
			figshare
			ArrayExpress
			European Nucleotide Archive
			PRoteomics IDEntifications database
			The European Genome-phenome Archive
			HUGO Gene Nomenclature Committee
			Eukaryotic Pathogen Database Resources
			PeptideAtlas
			European Mouse Mutant Archive
			NeuroMorpho.Org
			Rat Genome Database
			Database of Single Nucleotide Polymorphism
			Gene Expression Omnibus
			Sequence Read Archive
			PubChem
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Dryad
			ClinicalTrials.gov
			National Addiction & HIV Data Archive Program (NAHDAP)
			PhysioNet
			National Database for Autism Research (NDAR)
			Biological General Repository for Interaction Datasets
			The Cancer Imaging Archive
			UniProt Knowledgebase
			Xenopus laevis and tropicalis biology and genomics resource
			Database of Interacting Proteins
			Knockout Mouse Project
			miRBase Sequence Database
			The Zebrafish Information Network
			Biological Magnetic Resonance Databank
			VectorBase
			Electron Microscopy Data Bank
			Integrated Taxonomic Information System
			ProteomeXchange
			MGnify
			Protein Circular Dichroism Data Bank
			OpenNeuro
			Coherent X-ray Imaging Data Bank
			 International Neuroimaging Data-Sharing Initiative
			European Variation Archive
			Experimental data repository for KInetic MOdels of biological SYStems
			PANGAEA - Data Publisher for Earth and Environmental Science
			Environmental Data Initiative Data Repository
			Global Biodiversity Information Facility
			NCBI Trace Archives
			Open Science Framework
			SICAS medical image repository
			MGI Mouse Gene Expression Database
			Worldwide Protein Data Bank
			PlasmID
			Seanoe
			STRENDA DB
			Image Data Resource
			Zenodo
			NOAA National Centres for Environmental Information
			Oak Ridge National Laboratory, Distributed Active Archive Centre for Biogeochemical Dynamics
			Harvard Dataverse
			World Data Center for Climate at DRKZ
			Australian Antarctic Data Centre
			High Energy Physics Data Repository
			SIMBAD Astronomical Database
			UK Solar System Data Centre Data Archive
			Qualitative Data Repository
			FAIRsharing
			G-Node Data Infrastructure Services
			Code Ocean
			GitHub
		Added:
			FlyBase
			IntAct molecular interaction database
			The Arabidopsis Information Resource
			WormBase
			GenomeRNAi
			MetaboLights
			Influenza Research Database
			FlowRepository
			figshare
			European Nucleotide Archive
			PRoteomics IDEntifications database
			The European Genome-phenome Archive
			HUGO Gene Nomenclature Committee
			Eukaryotic Pathogen Database Resources
			PeptideAtlas
			NeuroMorpho.Org
			Rat Genome Database
			Gene Expression Omnibus
			Sequence Read Archive
			PubChem
			National Addiction & HIV Data Archive Program (NAHDAP)
			PhysioNet
			National Database for Autism Research (NDAR)
			The Cancer Imaging Archive
			UniProt Knowledgebase
			Xenopus laevis and tropicalis biology and genomics resource
			miRBase Sequence Database
			The Zebrafish Information Network
			VectorBase
			Electron Microscopy Data Bank
			Integrated Taxonomic Information System
			ProteomeXchange
			MGnify
			Protein Circular Dichroism Data Bank
			OpenNeuro
			 International Neuroimaging Data-Sharing Initiative
			European Variation Archive
			Experimental data repository for KInetic MOdels of biological SYStems
			PANGAEA - Data Publisher for Earth and Environmental Science
			Environmental Data Initiative Data Repository
			Global Biodiversity Information Facility
			NCBI Trace Archives
			SICAS medical image repository
			MGI Mouse Gene Expression Database
			Seanoe
			STRENDA DB
			Image Data Resource
			Zenodo
			NOAA National Centres for Environmental Information
			Oak Ridge National Laboratory, Distributed Active Archive Centre for Biogeochemical Dynamics
			World Data Center for Climate at DRKZ
			High Energy Physics Data Repository
			SIMBAD Astronomical Database
			UK Solar System Data Centre Data Archive
			Qualitative Data Repository
			G-Node Data Infrastructure Services
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.F0QmCP' by 'The FAIRsharing Team' at 15:25, 06 Jun 2019 (approved):

	'db_implementation' has been modified:
		Before:
			GenBank
			Addgene
			American Type Culture Collection database
			European Mouse Mutant Archive
			Dryad
			ClinicalTrials.gov
			Knockout Mouse Project
			Open Science Framework
			Worldwide Protein Data Bank
			PlasmID
			Harvard Dataverse
			FAIRsharing
			GitHub
		After:
			GenBank
			Crystallography Open Database
			DNA Data Bank of Japan
			Addgene
			American Type Culture Collection database
			ArrayExpress
			European Mouse Mutant Archive
			Database of Single Nucleotide Polymorphism
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Dryad
			ClinicalTrials.gov
			Biological General Repository for Interaction Datasets
			Database of Interacting Proteins
			Knockout Mouse Project
			Biological Magnetic Resonance Databank
			Coherent X-ray Imaging Data Bank
			Open Science Framework
			Worldwide Protein Data Bank
			PlasmID
			Harvard Dataverse
			Australian Antarctic Data Centre
			FAIRsharing
			Code Ocean
			GitHub
		Added:
			Crystallography Open Database
			DNA Data Bank of Japan
			ArrayExpress
			Database of Single Nucleotide Polymorphism
			Database of Genotypes and Phenotypes
			Database of genomic structural VARiation
			Biological General Repository for Interaction Datasets
			Database of Interacting Proteins
			Biological Magnetic Resonance Databank
			Coherent X-ray Imaging Data Bank
			Australian Antarctic Data Centre
			Code Ocean
		Removed:

In Collections

COVID-19 Rapid Review Initiative

Organisations

Record Maintainer

This record is maintained by wm.chan

Maintains

eLife Sciences Publications, Ltd (Publisher)

Policy External Cross References

TOP Level Data Transparency: 2: Requires data transparency

TOP qualifying comments: eLife requires all datasets associated with an article to be made freely and widely available

Standards and Databases mentioned in this policy

Databases

Standards

Usage / Access

Conditions of Use

Support

No support information provided.

Additional Information

Contact

Wei Mun Chan

eLife Recommended Repositories and Standards

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