standards > model/format > DOI:10.25504/FAIRsharing.LKgRmR
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ready Genomedata


General Information
Genomedata is a format for efficient storage of multiple tracks of numeric data anchored to a genome. The format allows fast random access to hundreds of gigabytes of data, while retaining a small disk space footprint. We have also developed utilities to load data into this format. A reference implementation in Python and C components is available here under the GNU General Public License.

Homepage https://genomedata.hoffmanlab.org/

Countries that developed this resource Canada , United States

Created in 2009

Taxonomic range




How to cite this record FAIRsharing.org: Genomedata; Genomedata; DOI: https://doi.org/10.25504/FAIRsharing.LKgRmR; Last edited: Jan. 25, 2021, 4:29 p.m.; Last accessed: Oct 27 2021 5 p.m.

Publication for citation  The Genomedata format for storing large-scale functional genomics data. Hoffman MM,Buske OJ,Noble WS; Bioinformatics ; 2010; 10.1093/bioinformatics/btq164;


This record is maintained by michaelhoffman

Record added: Dec. 18, 2020, 7:24 p.m.
Record updated: Jan. 25, 2021, 4:29 p.m. by michaelhoffman.




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Additional Information

Contact Michael Hoffman   ORCID

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Applies to: Database software




Publications

The Genomedata format for storing large-scale functional genomics data.

Hoffman MM,Buske OJ,Noble WS
Bioinformatics 2010

View Paper (PubMed) View Publication

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