Mass Spectrometry Virtual Interactive Environment
Abbreviation:MassIVE
Homepage https://massive.ucsd.edu/ProteoSAFe/static/massive.jsp
Developed in United States
Created in 2012
Taxonomic range
Scope and data types
In the following recommendations:
How to cite this record FAIRsharing.org: MassIVE; Mass Spectrometry Virtual Interactive Environment; DOI: https://doi.org/10.25504/FAIRsharing.LYsiMd; Last edited: Oct. 29, 2018, 1:24 p.m.; Last accessed: Nov 17 2018 10:13 p.m.
Record added: Aug. 29, 2018, 7:39 p.m.
Record updated:
Oct. 16, 2018, 2:22 p.m. by The FAIRsharing Team.
| support email | General Support |
| help | General Information |
| help | Demonstration Videos |
Additional Information
| Contact | Mingxun Wang ORCID |
| Reanalyze Spectra | http://proteomics.ucsd.edu/service/massive/documentation/reanalyze-spe ... |
| Protein Explorer (beta) | https://massive.ucsd.edu/ProteoSAFe/protein_explorer_splash.jsp |
| Results Comparison | http://proteomics2.ucsd.edu/ProteoSAFe/index.jsp?params=%7B%22workflow ... |
Conditions of Use
Applies to: Data useData Curation
| Share / Upload Results | http://proteomics.ucsd.edu/service/massive/documentation/share-reanaly ... |
Data Access
| Deposition Documentation | http://proteomics.ucsd.edu/service/massive/documentation/submit-data/ |
| Browse Data | https://massive.ucsd.edu/ProteoSAFe/datasets.jsp#%7B%22query%22%3A%7B% ... |
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition.
Deutsch EW,Csordas A,Sun Z,Jarnuczak A,Perez-Riverol Y,Ternent T,Campbell DS,Bernal-Llinares M,Okuda S,Kawano S,Moritz RL,Carver JJ,Wang M,Ishihama Y,Bandeira N,Hermjakob H,Vizcaino JA
Nucleic Acids Res 2016
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking.
Wang M,Carver JJ,Phelan VV,Sanchez LM,Garg N,Peng Y,Nguyen DD,Watrous J,Kapono CA,Luzzatto-Knaan T,Porto C,Bouslimani A,Melnik AV,Meehan MJ,Liu WT,Crusemann M,Boudreau PD,Esquenazi E,Sandoval-Calderon M,Kersten RD,Pace LA,Quinn RA,Duncan KR,Hsu CC,Floros DJ,Gavilan RG,Kleigrewe K,Northen T,Dutton RJ,Parrot D,Carlson EE,Aigle B,Michelsen CF,Jelsbak L,Sohlenkamp C,Pevzner P,Edlund A,McLean J,Piel J,Murphy BT,Gerwick L,Liaw CC,Yang YL,Humpf HU,Maansson M,Keyzers RA,Sims AC,Johnson AR,Sidebottom AM,Sedio BE,Klitgaard A,Larson CB,P CAB,Torres-Mendoza D,Gonzalez DJ,Silva DB,Marques LM,Demarque DP,Pociute E,O'Neill EC,Briand E,Helfrich EJN,Granatosky EA,Glukhov E,Ryffel F,Houson H,Mohimani H,Kharbush JJ,Zeng Y,Vorholt JA,Kurita KL,Charusanti P,McPhail KL,Nielsen KF,Vuong L,Elfeki M,Traxler MF,Engene N,Koyama N,Vining OB,Baric R,Silva RR,Mascuch SJ,Tomasi S,Jenkins S,Macherla V,Hoffman T,Agarwal V,Williams PG,Dai J,Neupane R,Gurr J,Rodriguez AMC,Lamsa A,Zhang C,Dorrestein K,Duggan BM,Almaliti J,Allard PM,Phapale P,Nothias LF,Alexandrov T,Litaudon M,Wolfender JL,Kyle JE,Metz TO,Peryea T,Nguyen DT,VanLeer D,Shinn P,Jadhav A,Muller R,Waters KM,Shi W,Liu X,Zhang L,Knight R,Jensen PR,Palsson BO,Pogliano K,Linington RG,Gutierrez M,Lopes NP,Gerwick WH,Moore BS,Dorrestein PC,Bandeira N
Nat Biotechnol 2016
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
Record Maintainer
This record is maintained by mwang87
Funds
NIGMS (Government body)
Maintains
Center for Computational Mass Spectrometry, University of California San Diego, United States (Research institute) Lead
Grant Number(s)
5P41GM103484-09 (NIGMS)
