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Blackfynn Discover

General Information

Blackfynn Discover is a public resource for accessing large public Neuroscience datasets. Blackfynn Discover was developed through grants from the NIH NIDA, NIH CommonFund, DARPA, and others to provide a sustainable solution for fostering collaboration in the Neurosciences.

Homepage https://discover.blackfynn.com

Countries that developed this resource United States

Created in 2019

Taxonomic range

Not applicable

How to cite this record FAIRsharing.org: Blackfynn Discover; Blackfynn Discover; DOI: https://doi.org/10.25504/FAIRsharing.PD1PEt; Last edited: Dec. 19, 2019, 11:06 a.m.; Last accessed: Sep 22 2020 5:15 p.m.

This record is maintained by jwagenaar ORCID

Record added: Sept. 25, 2019, 8:55 p.m.
Record updated: Dec. 4, 2019, 3:30 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.PD1PEt' by 'The FAIRsharing Team' at 15:30, 04 Dec 2019 (approved):

	'status' has been modified:
		Before: DEV
		After: RDY

Edits to 'https://fairsharing.org/FAIRsharing.PD1PEt' by 'The FAIRsharing Team' at 11:53, 10 Oct 2019 (approved):

	'status' has been modified:
		Before: RDY
		After: DEV

	'user_defined_tags' has been modified:
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			Computational Neuroscience
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		Added:
		Removed:
			Computational Neuroscience

	'onto_disciplines' has been modified:
		Before:
			Bioengineering
			Neurology
			Neuroscience
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		Removed:
			Bioengineering
			Neurology
			Neuroscience

Edits to 'https://fairsharing.org/FAIRsharing.PD1PEt' by 'jwagenaar' at 14:21, 26 Sep 2019 (approved):

	'related_databases' has been modified:
		Before:
		After:
			Open Researcher and Contributor ID Registry
			DataCite Repository
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			Open Researcher and Contributor ID Registry
			DataCite Repository
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	'organizations' has been modified:
		Before:
			NIH|https://datascience.nih.gov|Funds
			NIH Common Fund, USA|https://commonfund.nih.gov|Funds
			Blackfynn Inc.|https://www.blackfynn.com/academia|Maintains
		After:
			NIH|https://datascience.nih.gov|Funds
			NIH Common Fund, USA|https://commonfund.nih.gov|Funds
			Blackfynn Inc.|https://www.blackfynn.com/academia|Maintains
			NIH NIDA|https://www.drugabuse.gov/|Funds
		Added:
			NIH NIDA|https://www.drugabuse.gov/|Funds
		Removed:

	'standardsImplemented' has been modified:
		Before:
			European Data Format
			Digital Imaging and COmmunications in Medicine
			NIfTI-1 Data Format
		After:
			European Data Format
			Digital Imaging and COmmunications in Medicine
			NIfTI-1 Data Format
			Open Researcher and Contributor iD Identifier Schema
			Digital Object Identifier
			Open Microscopy Environment - Tagged Image File Format
		Added:
			Open Researcher and Contributor iD Identifier Schema
			Digital Object Identifier
			Open Microscopy Environment - Tagged Image File Format
		Removed:

	'grants' has been modified:
		Before:
			NIH 1OT3OD025347-01
		After:
			NIH 3OT3OD025347-01S2
			NIH 5R44DA044929-02 
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			NIH 3OT3OD025347-01S2
			NIH 5R44DA044929-02 
		Removed:
			NIH 1OT3OD025347-01

	'taxonomies' has been modified:
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			Homo sapiens
		After:
			Not applicable
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			Not applicable
		Removed:
			Homo sapiens

Edits to 'https://fairsharing.org/FAIRsharing.PD1PEt' by 'The FAIRsharing Team' at 12:19, 26 Sep 2019 (approved):

	'taxonomies' has been modified:
		Before:
			Not applicable
		After:
			Homo sapiens
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			Homo sapiens
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			Not applicable

	'supportLinks' has been modified:
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			help|https://help.blackfynn.com
		After:
			contact form|https://www.blackfynn.com/contact/
			help|https://help.blackfynn.com
			online documentation|https://www.blackfynn.com/about/
		Added:
			contact form|https://www.blackfynn.com/contact/
			online documentation|https://www.blackfynn.com/about/
		Removed:

	'dataProcesses' has been modified:
		Before:
			Blackfynn Discover
			Blackfynn Platform 
			Publish multiple versions of a  dataset on Blackfynn Discover
			Publish multiple versions of a  dataset on Blackfynn Discover
		After:
			Browse Blackfynn Discover
			Blackfynn Platform 
			Publish multiple versions of a dataset on Blackfynn Discover
			Publish multiple versions of a dataset on Blackfynn Discover
		Added:
			Browse Blackfynn Discover
			Publish multiple versions of a dataset on Blackfynn Discover
			Publish multiple versions of a dataset on Blackfynn Discover
		Removed:
			Blackfynn Discover
			Publish multiple versions of a  dataset on Blackfynn Discover
			Publish multiple versions of a  dataset on Blackfynn Discover

Edits to 'https://fairsharing.org/FAIRsharing.PD1PEt' by 'The FAIRsharing Team' at 12:15, 26 Sep 2019 (approved):

	'licences' has been modified:
		Before:
			Community Data License Agreement - Permissive, Version 1.0 (CDLA-Permissive-1.0)|https://cdla.io/permissive-1-0/|Data
			Community Data License Agreement - Sharing, Version 1.0 (CDLA-Sharing-1.0)|https://cdla.io/sharing-1-0/|Data
			Blackfynn Terms of Use|https://www.blackfynn.com/legal/terms/|Software
			Open Data Commons Open Database License (ODC ODbL)|http://opendatacommons.org/licenses/odbl/1.0/|Data
			Open Data Commons Attribution License (ODC-BY)|http://opendatacommons.org/licenses/by/1.0/|Data
			Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
		After:
			Community Data License Agreement - Permissive, Version 1.0 (CDLA-Permissive-1.0)|https://cdla.io/permissive-1-0/|Data
			Community Data License Agreement - Sharing, Version 1.0 (CDLA-Sharing-1.0)|https://cdla.io/sharing-1-0/|Data
			Open Data Commons Open Database License (ODC ODbL)|http://opendatacommons.org/licenses/odbl/1.0/|Data
			Open Data Commons Attribution License (ODC-BY)|http://opendatacommons.org/licenses/by/1.0/|Data
			Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0|http://opendatacommons.org/licenses/pddl/1.0/|Data
			Blackfynn Terms of Use|https://www.blackfynn.com/legal/terms/|Software
			Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication|https://creativecommons.org/publicdomain/zero/1.0/|Data
			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
			Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)|https://creativecommons.org/licenses/by-sa/4.0/|Data
		Added:
			Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication|https://creativecommons.org/publicdomain/zero/1.0/|Data
			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
			Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)|https://creativecommons.org/licenses/by-sa/4.0/|Data
		Removed:

Support

General

contact form	Blackfynn Contact Form
help	Blackfynn Help Center
online documentation	About Blackfynn

Additional Information

Contact

joost Wagenaar ORCID

Tools

Python Client	https://developer.blackfynn.io/python/latest/index.html
MATLAB Client	https://developer.blackfynn.io/matlab/index.html
Command Line Interface	https://developer.blackfynn.io/agent/index.html

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Applies to: Database software

Blackfynn Terms of Use

Data Versioning

Publish multiple versions of a dataset on Blackfynn Discover

https://app.blackfynn.io

Data Curation

Blackfynn Platform

https://app.blackfynn.io

Data Access

Browse Blackfynn Discover

https://discover.blackfynn.com

Data Release

Publish multiple versions of a dataset on Blackfynn Discover

https://app.blackfynn.io

REST Web Services

Blackfynn Discover and the Blackfynn Platform provide an open API to enable integrations for users who want to interact with the platform programmatically

https://developer.blackfynn.io/api/index.html

Publications

Data integration: Combined imaging and electrophysiology data in the cloud.

Kini LG,Davis KA,Wagenaar JB
Neuroimage 2015

View Paper (PubMed) View Publication

Collaborating and sharing data in epilepsy research.

Wagenaar JB,Worrell GA,Ives Z,Dumpelmann M,Litt B,Schulze-Bonhage A
J Clin Neurophysiol 2015

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

Metrics

No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by jwagenaar ORCID

Funds

NIH (Government body)
NIH Common Fund, USA (Government body)
NIH NIDA

Maintains

Blackfynn Inc. (Company) Lead

Grant Number(s)

NIH 3OT3OD025347-01S2 (NIH Common Fund, USA)
NIH 5R44DA044929-02 (NIH NIDA)

Blackfynn Discover

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