databases > DOI:10.25504/FAIRsharing.PkY7Hl
Update in progress: note to all users. FAIRsharing is always available for you to search and discover databases, standards and data policies. However, for producers of these resources who maintain or wish to add new records, please note that editing is disabled until September while we migrate our data to our new, improved system. Read our blog post or get in touch with us for more details.
21/09/21 Ongoing Network Maintenance: From the 21st of September FAIRsharing may be offline at various point during the day; we apologise for any inconvenience.

ready Cucurbit Genomics Database

Abbreviation:CuGenDB

General Information
The recent genome sequence assemblies of major cucurbit crop species, including cucumber, melon, watermelon and pumpkin have made it feasible to use advanced genomic approaches in cucurbit breeding. Under the CucCAP project (http://cuccap.org), the Cucurbit Genomics Database (CuGenDB) aims to accelerate the breeding progress of cucurbit crops. Tripal was used to help manage, store, distribute and analyze the large amount of recently generated genotype and phenotype data. CuGenDB integrates genetic, genomics, transcriptomics and other biological data.

Homepage http://cucurbitgenomics.org

Countries that developed this resource United States

Taxonomic range

Knowledge Domains 





How to cite this record FAIRsharing.org: CuGenDB; Cucurbit Genomics Database; DOI: https://doi.org/10.25504/FAIRsharing.PkY7Hl; Last edited: Jan. 9, 2019, 3:06 p.m.; Last accessed: Sep 25 2021 4:57 a.m.

Publication for citation  Cucurbit Genomics Database (CuGenDB): a central portal for comparative and functional genomics of cucurbit crops. Zheng Y,Wu S,Bai Y,Sun H,Jiao C,Guo S,Zhao K,Blanca J,Zhang Z,Huang S,Xu Y,Weng Y,Mazourek M,K Reddy U,Ando K,McCreight JD,Schaffer AA,Burger J,Tadmor Y,Katzir N,Tang X,Liu Y,Giovannoni JJ,Ling KS,Wechter WP,Levi A,Garcia-Mas J,Grumet R,Fei Z; Nucleic Acids Res ; 2018; 10.1093/nar/gky944;


This record is maintained by kentnf

Record added: Feb. 28, 2018, 1:39 p.m.
Record updated: Oct. 26, 2018, 3:36 p.m. by kentnf.

Show edit history


In Collections
Tripal

Support

General

contact form CuGenDB Contact Form
Mailing List CuGenDB Mailing List
online documentation Conference Presentation

Additional Information

Contact feibioinfolab@gmail.com


Access / Retrieve Data

Conditions of Use


Data Access

Search http://cucurbitgenomics.org/search
Download Data http://cucurbitgenomics.org/download



Publications

Cucurbit Genomics Database (CuGenDB): a central portal for comparative and functional genomics of cucurbit crops.

Zheng Y,Wu S,Bai Y,Sun H,Jiao C,Guo S,Zhao K,Blanca J,Zhang Z,Huang S,Xu Y,Weng Y,Mazourek M,K Reddy U,Ando K,McCreight JD,Schaffer AA,Burger J,Tadmor Y,Katzir N,Tang X,Liu Y,Giovannoni JJ,Ling KS,Wechter WP,Levi A,Garcia-Mas J,Grumet R,Fei Z
Nucleic Acids Res 2018

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is maintained by kentnf

Maintains