databases > DOI:10.25504/FAIRsharing.RyVjoS

ready National Cancer Institute's Genomic Data Commons

Abbreviation:NCI GDC

General Information
The National Cancer Institute’s (NCI’s) Genomic Data Commons (GDC) is a data sharing The National Cancer Institute's Genomic Data Commons (GDC) was created to promote precision medicine in oncology. It supports the import and standardization of genomic and clinical data from cancer research programs. The GDC contains NCI-generated data from some of the largest and most comprehensive cancer genomic datasets, including The Cancer Genome Atlas (TCGA) and Therapeutically Applicable Research to Generate Effective Therapies (TARGET). For the first time, these datasets have been harmonized using a common set of bioinformatics pipelines, so that the data can be directly compared. As a growing knowledge system for cancer, the GDC also enables researchers to submit data, and harmonizes these data for import into the GDC.

Homepage https://gdc.cancer.gov/

Countries that developed this resource United States

Created in 2016

Taxonomic range

Knowledge Domains 





How to cite this record FAIRsharing.org: NCI GDC; National Cancer Institute's Genomic Data Commons; DOI: https://doi.org/10.25504/FAIRsharing.RyVjoS; Last edited: July 31, 2020, 2:04 p.m.; Last accessed: Sep 30 2020 9:59 p.m.

Publication for citation  Toward a Shared Vision for Cancer Genomic Data. Grossman RL,Heath AP,Ferretti V,Varmus HE,Lowy DR,Kibbe WA,Staudt LM; N Engl J Med ; 2016; 10.1056/NEJMp1607591;


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Record added: May 11, 2020, 3:49 p.m.
Record updated: May 13, 2020, 6:08 p.m. by wwysoc2.

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In Collections
NIH-supported data repositories

Support

General

FAQ GDC FAQ
blog News
contact form Contact Information
help Data Submission User Guide
help API User Guide
help Guide for Data Analysis
help Guide for Exploring Data
online documentation About the Data
online documentation GDC Overview
online documentation Accepted File Formats
twitter @NCIGDC_Updates

Additional Information

Contact GDC Help Desk


Access / Retrieve Data

Conditions of Use


Data Curation

Data Submission https://portal.gdc.cancer.gov/submission

Data Access

Browse via Data Portal https://portal.gdc.cancer.gov/

REST Web Services

GDC API https://gdc.cancer.gov/developers/gdc-application-programming-interfac ...


Publications

Toward a Shared Vision for Cancer Genomic Data.

Grossman RL,Heath AP,Ferretti V,Varmus HE,Lowy DR,Kibbe WA,Staudt LM
N Engl J Med 2016

View Paper (PubMed) View Publication

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