How to cite this record
FAIRsharing.org: MAR; MAR databases; DOI: https://doi.org/10.25504/FAIRsharing.SnTbUa;
Last edited: Dec. 19, 2019, 11:06 a.m.; Last accessed: Apr 17 2021 6:08 a.m.
Publication for citation
The MAR databases: development and implementation of databases specific for marine metagenomics
Klemetsen T, Raknes IA, Fu J, Agafonov A, Balasundaram SV, Tartari G, Robertsen E, Willassen NP; NAR ;
2017;
10.1093/nar/gkx1036;
Edits to 'https://fairsharing.org/FAIRsharing.SnTbUa' by 'The FAIRsharing Team' at 18:30, 05 Nov 2019 (approved):
'licences' has been modified:
Before:
After:
Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)|https://creativecommons.org/licenses/by-nd/4.0/|Data
Added:
Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)|https://creativecommons.org/licenses/by-nd/4.0/|Data
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.SnTbUa' by 'The FAIRsharing Team' at 16:52, 05 Nov 2019 (approved):
'organizations' has been modified:
Before:
UiT The Arctic university of Norway|https://uit.no|Maintains
After:
UiT The Arctic university of Norway|https://uit.no|Maintains
ELIXIR Norway|http://salmobase.org/www.bioinfo.no|Maintains,Funds
ELIXIR-EXCELERATE programme, ELIXIR-HUB, UK|https://www.elixir-europe.org/about-us/how-funded/eu-projects/excelerate|Funds
Horizon 2020 Programme of the European Union - EMBRIC|https://ec.europa.eu/programmes/horizon2020/|Funds
The Research Council of Norway|http://www.forskningsradet.no/en/Home_page/1177315753906|Funds
Added:
ELIXIR Norway|http://salmobase.org/www.bioinfo.no|Maintains,Funds
ELIXIR-EXCELERATE programme, ELIXIR-HUB, UK|https://www.elixir-europe.org/about-us/how-funded/eu-projects/excelerate|Funds
Horizon 2020 Programme of the European Union - EMBRIC|https://ec.europa.eu/programmes/horizon2020/|Funds
The Research Council of Norway|http://www.forskningsradet.no/en/Home_page/1177315753906|Funds
Removed:
'standardsImplemented' has been modified:
Before:
Environment Ontology
Evidence codes
Minimum Information about a (Meta)Genome Sequence
Gazetteer
After:
Environment Ontology
Evidence codes
Minimum Information about a (Meta)Genome Sequence
Gazetteer
Minimum Information about any (x) Sequence
Added:
Minimum Information about any (x) Sequence
Removed:
'related_databases' has been modified:
Before:
After:
European Nucleotide Archive
Reference Sequence Database
SILVA
Added:
European Nucleotide Archive
Reference Sequence Database
SILVA
Removed:
'supportLinks' has been modified:
Before:
After:
help|https://mmp.sfb.uit.no/help/#/
online documentation|https://mmp.sfb.uit.no/documentation/#/
online documentation|https://mmp.sfb.uit.no/community/
Added:
help|https://mmp.sfb.uit.no/help/#/
online documentation|https://mmp.sfb.uit.no/documentation/#/
online documentation|https://mmp.sfb.uit.no/community/
Removed:
'description' has been modified:
Before: The MAR databases is a collection of manually curated marine microbial contextual and sequence databases.
After: The MAR databases is a collection of manually curated marine microbial contextual and sequence databases, based at the Marine Metagenomics Portal. This was developed as a part of the ELIXIR EXCELERATE project in 2017 and is maintained by The Center for Bioinformatics (SfB) at the UiT The Arctic University of Norway. SfB is hosting the UiT node of ELIXIR Norway. The MarRef, MarDb, MarFun and MarCat contextual databases are built by compiling data from a number of public available sequence, taxonomy and literature databases in a semi-automatic fashion.
'onto_disciplines' has been modified:
Before:
Marine Biology
After:
Genomics
Marine Biology
Metagenomics
Added:
Genomics
Metagenomics
Removed:
'onto_domains' has been modified:
Before:
marine environment
marine metagenome
After:
DNA sequence
Genome annotation
Metagenome
marine environment
marine metagenome
Added:
DNA sequence
Genome annotation
Metagenome
Removed:
'grants' has been modified:
Before:
After:
208481
270068
654008
676559
Added:
208481
270068
654008
676559
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.SnTbUa' by 'The FAIRsharing Team' at 16:52, 05 Nov 2019 (approved):
'organizations' has been modified:
Before:
UiT The Arctic university of Norway|https://uit.no|Maintains
After:
UiT The Arctic university of Norway|https://uit.no|Maintains
ELIXIR Norway|http://salmobase.org/www.bioinfo.no|Maintains,Funds
ELIXIR-EXCELERATE programme, ELIXIR-HUB, UK|https://www.elixir-europe.org/about-us/how-funded/eu-projects/excelerate|Funds
Horizon 2020 Programme of the European Union - EMBRIC|https://ec.europa.eu/programmes/horizon2020/|Funds
The Research Council of Norway|http://www.forskningsradet.no/en/Home_page/1177315753906|Funds
Added:
ELIXIR Norway|http://salmobase.org/www.bioinfo.no|Maintains,Funds
ELIXIR-EXCELERATE programme, ELIXIR-HUB, UK|https://www.elixir-europe.org/about-us/how-funded/eu-projects/excelerate|Funds
Horizon 2020 Programme of the European Union - EMBRIC|https://ec.europa.eu/programmes/horizon2020/|Funds
The Research Council of Norway|http://www.forskningsradet.no/en/Home_page/1177315753906|Funds
Removed:
'standardsImplemented' has been modified:
Before:
Environment Ontology
Evidence codes
Minimum Information about a (Meta)Genome Sequence
Gazetteer
After:
Environment Ontology
Evidence codes
Minimum Information about a (Meta)Genome Sequence
Gazetteer
Minimum Information about any (x) Sequence
Added:
Minimum Information about any (x) Sequence
Removed:
'related_databases' has been modified:
Before:
After:
European Nucleotide Archive
Reference Sequence Database
SILVA
Added:
European Nucleotide Archive
Reference Sequence Database
SILVA
Removed:
'supportLinks' has been modified:
Before:
After:
help|https://mmp.sfb.uit.no/help/#/
online documentation|https://mmp.sfb.uit.no/documentation/#/
online documentation|https://mmp.sfb.uit.no/community/
Added:
help|https://mmp.sfb.uit.no/help/#/
online documentation|https://mmp.sfb.uit.no/documentation/#/
online documentation|https://mmp.sfb.uit.no/community/
Removed:
'description' has been modified:
Before: The MAR databases is a collection of manually curated marine microbial contextual and sequence databases.
After: The MAR databases is a collection of manually curated marine microbial contextual and sequence databases, based at the Marine Metagenomics Portal. This was developed as a part of the ELIXIR EXCELERATE project in 2017 and is maintained by The Center for Bioinformatics (SfB) at the UiT The Arctic University of Norway. SfB is hosting the UiT node of ELIXIR Norway. The MarRef, MarDb, MarFun and MarCat contextual databases are built by compiling data from a number of public available sequence, taxonomy and literature databases in a semi-automatic fashion.
'onto_disciplines' has been modified:
Before:
Marine Biology
After:
Genomics
Marine Biology
Metagenomics
Added:
Genomics
Metagenomics
Removed:
'onto_domains' has been modified:
Before:
marine environment
marine metagenome
After:
DNA sequence
Genome annotation
Metagenome
marine environment
marine metagenome
Added:
DNA sequence
Genome annotation
Metagenome
Removed:
'grants' has been modified:
Before:
After:
208481
270068
654008
676559
Added:
208481
270068
654008
676559
Removed: