databases > DOI:10.25504/FAIRsharing.VW2yBw
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ready Genome3D

General Information
Genome3D is a resource that provides structural annotation and 3D models of genomes of model organisms such as human, yeast and E.coli. The database can be used to predict protein structures that have not yet been identified. Genome3D uses structural classification data from several UK-based resources including CATH and SCOP.

Homepage http://genome3d.eu

Countries that developed this resource United Kingdom

Created in 2012

Subjects 





How to cite this record FAIRsharing.org: Genome3D; Genome3D; DOI: https://doi.org/10.25504/FAIRsharing.VW2yBw; Last edited: March 19, 2021, 1 p.m.; Last accessed: Sep 25 2021 9:50 p.m.

Publication for citation  Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C; Nucleic Acids Res ; 2012; 10.1093/nar/gks1266;


This record is maintained by isillitoe  ORCID

Record added: Aug. 3, 2018, 9 p.m.
Record updated: Feb. 24, 2021, 10:40 a.m. by The FAIRsharing Team.

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In Collections
RDA Covid-19 WG Resources

Support

General

FAQ http://genome3d.eu/wiki/page/Public/Page ...
help Genome3D Structures
training Tutorials
twitter Twitter

Additional Information

Contact Ian Sillitoe

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Access / Retrieve Data

Conditions of Use


Data Access

Search http://genome3d.eu/search
Browse http://genome3d.eu/search/?species=human



Publications

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

Genome3D: exploiting structure to help users understand their sequences.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cozzetto D,Dana JM,Filippis I,Gough J,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mistry J,Murzin AG,Ochoa-Montano B,Oates ME,Punta M,Rackham OJ,Stahlhacke J,Sternberg MJ,Velankar S,Orengo C
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

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Credit

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Grant Number(s)

  • BB/I025050/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • MC U105192716 (Medical Research Council (MRC), London, UK)