Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 14:10, 04 Feb 2021 (approved):
'publications' has been modified:
Before:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Wasula Kankanamge, Zichen Wang, Kaitlyn Andreano, Ross A. Hamilton, Yue Chen, Angelica Hamilton, Marin L. Gantner, Michael Dehart, Shijing Qu, Susan G. Hilsenbeck, Lauren B. Becnel, Dave Bridges, Avi Maayan, Janice M. Huss, Fabio Stossi, Charles E. Foulds, Anastasia Kralli, Donald P. McDonnell & Neil J. McKenna |Scientific Data|2019
After:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, et al.|Scientific Data|2019
Added:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, et al.|Scientific Data|2019
Removed:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Wasula Kankanamge, Zichen Wang, Kaitlyn Andreano, Ross A. Hamilton, Yue Chen, Angelica Hamilton, Marin L. Gantner, Michael Dehart, Shijing Qu, Susan G. Hilsenbeck, Lauren B. Becnel, Dave Bridges, Avi Maayan, Janice M. Huss, Fabio Stossi, Charles E. Foulds, Anastasia Kralli, Donald P. McDonnell & Neil J. McKenna |Scientific Data|2019
'onto_domains' has been modified:
Before:
ChIP-seq assay
Differential gene expression analysis
Gene expression data
Pathway or network prediction
Receptor
Transcription Factor
enzyme
gene expression
pathway
regulation of gene expression
signaling
After:
ChIP-seq assay
Differential gene expression analysis
Gene expression data
Prediction and recognition
Receptor
Transcription Factor
enzyme
gene expression
pathway
regulation of gene expression
signaling
Added:
Prediction and recognition
Removed:
Pathway or network prediction
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 15:08, 08 Nov 2019 (approved):
'standardsImplemented' has been modified:
Before:
Chemical Entities of Biological Interest
Gene Ontology
CAS Registry Number
Transcription Factor Class
After:
Chemical Entities of Biological Interest
Gene Ontology
Digital Object Identifier
CAS Registry Number
Transcription Factor Class
Added:
Digital Object Identifier
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 15:45, 07 Nov 2019 (approved):
'miriam_id' has been modified:
Before: MIR:00000726
After: MIR:00000730
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 15:35, 07 Nov 2019 (approved):
'miriam_id' has been modified:
Before: MIR:00000730
After: MIR:00000726
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 15:13, 07 Nov 2019 (approved):
'miriam_id' has been modified:
Before:
After: MIR:00000730
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 12:49, 07 Nov 2019 (approved):
'standardsImplemented' has been modified:
Before:
Chemical Entities of Biological Interest
Gene Ontology
CAS Registry Number
After:
Chemical Entities of Biological Interest
Gene Ontology
CAS Registry Number
Transcription Factor Class
Added:
Transcription Factor Class
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 09:39, 05 Nov 2019 (approved):
'related_databases' has been modified:
Before:
HUGO Gene Nomenclature Committee
Rat Genome Database
Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
PubChem
ExplorEnz
Nuclear Receptor Signaling Atlas
After:
HUGO Gene Nomenclature Committee
IUPHAR/BPS Guide to PHARMACOLOGY
Rat Genome Database
Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
PubChem
ExplorEnz
Nuclear Receptor Signaling Atlas
Added:
IUPHAR/BPS Guide to PHARMACOLOGY
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 09:00, 05 Nov 2019 (approved):
'related_databases' has been modified:
Before:
Nuclear Receptor Signaling Atlas
After:
HUGO Gene Nomenclature Committee
Rat Genome Database
Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
PubChem
ExplorEnz
Nuclear Receptor Signaling Atlas
Added:
HUGO Gene Nomenclature Committee
Rat Genome Database
Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
PubChem
ExplorEnz
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 18:12, 04 Nov 2019 (approved):
'standardsImplemented' has been modified:
Before:
After:
Gene Ontology
Chemical Entities of Biological Interest
CAS Registry Number
Added:
Gene Ontology
Chemical Entities of Biological Interest
CAS Registry Number
Removed:
'miriam_id' has been modified:
Before: None
After:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 20:36, 01 Nov 2019 (approved):
'doi' has been modified:
Before: None
After:
'miriam_id' has been modified:
Before:
After: None
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 19:44, 01 Nov 2019 (approved):
'status' has been modified:
Before: DEV
After: RDY
'organizations' has been modified:
Before:
Baylor College of Medicine (BCM), USA|https://www.bcm.edu/|Maintains
After:
Baylor College of Medicine (BCM), USA|https://www.bcm.edu/|Maintains
NIDDK|https://www.niddk.nih.gov/|Funds
Added:
NIDDK|https://www.niddk.nih.gov/|Funds
Removed:
'grants' has been modified:
Before:
After:
DK097748
DK097771
Added:
DK097748
DK097771
Removed:
'onto_domains' has been modified:
Before:
ChIP-seq assay
Receptor
Transcription Factor
enzyme
signaling
After:
ChIP-seq assay
Differential gene expression analysis
Gene expression data
Pathway or network prediction
Receptor
Transcription Factor
enzyme
gene expression
pathway
regulation of gene expression
signaling
Added:
Differential gene expression analysis
Gene expression data
Pathway or network prediction
gene expression
pathway
regulation of gene expression
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 18:59, 01 Nov 2019 (approved):
'tools' has been modified:
Before:
After:
Ominer|1.0|https://www.signalingpathways.org/ominer/query.jsf
Added:
Ominer|1.0|https://www.signalingpathways.org/ominer/query.jsf
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'nursa' at 17:30, 01 Nov 2019 (approved):
'accessPoints' has been modified:
Before:
After:
REST|https://www.signalingpathways.org/docs/|Programmatic access to all SPP underlying data points and their associated metadata are supported by a RESTful API
Added:
REST|https://www.signalingpathways.org/docs/|Programmatic access to all SPP underlying data points and their associated metadata are supported by a RESTful API
Removed:
'homepage' has been modified:
Before: https://beta.signalingpathways.org/index.jsf
After: https://www.signalingpathways.org/index.jsf
'description' has been modified:
Before: The Signaling Pathways Project is a multi-omics knowledgemine based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Our goal is to create a resource where scientists can routinely generate research hypotheses or validate bench data relevant to cellular signaling pathways.
After: The Signaling Pathways Project is an integrated 'omics knowledgebase based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Our goal is to create a resource where scientists can routinely generate research hypotheses or validate bench data relevant to cellular signaling pathways.
'publications' has been modified:
Before:
The Signaling Pathways Project: an integrated 'omics knowledgebase for mammalian cellular signaling pathways|Scott Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Zichen Wang, Kaitlyn Andreano, Ross Hamilton, Yue Chen, Angelica Hamilton, Marin Gantner, Michael Dehart, Shijing Qu, Susan Hilsenbeck, Lauren Becnel, Dave Bridges, Avi Maayan, Janice Huss, Fabio Stossi, Charles Foulds, Anastasia Kralli, Donald McDonnell, Neil McKenna|BioRxiv|2018
After:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Wasula Kankanamge, Zichen Wang, Kaitlyn Andreano, Ross A. Hamilton, Yue Chen, Angelica Hamilton, Marin L. Gantner, Michael Dehart, Shijing Qu, Susan G. Hilsenbeck, Lauren B. Becnel, Dave Bridges, Avi Maayan, Janice M. Huss, Fabio Stossi, Charles E. Foulds, Anastasia Kralli, Donald P. McDonnell & Neil J. McKenna |Scientific Data|2019
Added:
The Signaling Pathways Project, an integrated omics knowledgebase for mammalian cellular signaling pathways|Scott A. Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Wasula Kankanamge, Zichen Wang, Kaitlyn Andreano, Ross A. Hamilton, Yue Chen, Angelica Hamilton, Marin L. Gantner, Michael Dehart, Shijing Qu, Susan G. Hilsenbeck, Lauren B. Becnel, Dave Bridges, Avi Maayan, Janice M. Huss, Fabio Stossi, Charles E. Foulds, Anastasia Kralli, Donald P. McDonnell & Neil J. McKenna |Scientific Data|2019
Removed:
The Signaling Pathways Project: an integrated 'omics knowledgebase for mammalian cellular signaling pathways|Scott Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti, Zichen Wang, Kaitlyn Andreano, Ross Hamilton, Yue Chen, Angelica Hamilton, Marin Gantner, Michael Dehart, Shijing Qu, Susan Hilsenbeck, Lauren Becnel, Dave Bridges, Avi Maayan, Janice Huss, Fabio Stossi, Charles Foulds, Anastasia Kralli, Donald McDonnell, Neil McKenna|BioRxiv|2018
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 14:01, 05 Jun 2019 (approved):
'status' has been modified:
Before: RDY
After: DEV
'related_databases' has been modified:
Before:
After:
Nuclear Receptor Signaling Atlas
Added:
Nuclear Receptor Signaling Atlas
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.WxI96O' by 'The FAIRsharing Team' at 12:26, 05 Jun 2019 (approved):
'organizations' has been modified:
Before:
After:
Baylor College of Medicine (BCM), USA|https://www.bcm.edu/|Maintains
Added:
Baylor College of Medicine (BCM), USA|https://www.bcm.edu/|Maintains
Removed:
'supportLinks' has been modified:
Before:
After:
online documentation|https://beta.signalingpathways.org/about/index.jsf
twitter|@sigpathproject
Added:
online documentation|https://beta.signalingpathways.org/about/index.jsf
twitter|@sigpathproject
Removed:
'description' has been modified:
Before: The Signaling Pathways Project is a multi-omics knowledgemine based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Our goal is to create a resource where scientists can routinely generate research hypotheses or validate bench relevant to cellular signaling pathways.
After: The Signaling Pathways Project is a multi-omics knowledgemine based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Our goal is to create a resource where scientists can routinely generate research hypotheses or validate bench data relevant to cellular signaling pathways.
'countries' has been modified:
Before:
After:
United States
Added:
United States
Removed:
'licences' has been modified:
Before:
After:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Added:
Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
Removed:
'onto_disciplines' has been modified:
Before:
After:
Omics
Transcriptomics
Added:
Omics
Transcriptomics
Removed:
'dataProcesses' has been modified:
Before:
After:
Browse
Search (Ominer)
Added:
Browse
Search (Ominer)
Removed:
'onto_domains' has been modified:
Before:
After:
ChIP-seq assay
Enzymes
Receptor
Transcription Factor
enzyme
signaling
Added:
ChIP-seq assay
Enzymes
Receptor
Transcription Factor
enzyme
signaling
Removed: