databases > DOI:10.25504/FAIRsharing.Yedluf

ready Clinical Interpretation of Variants in Cancer

Abbreviation:CIViC

General Information
CIViC is an expert-crowdsourced knowledgebase for Clinical Interpretation of Variants in Cancer describing the therapeutic, prognostic, diagnostic and predisposing relevance of inherited and somatic variants of all types. Realizing precision medicine will require information to be centralized, debated and interpreted for application in the clinic. CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer. Our goal is to enable precision medicine by providing an educational forum for dissemination of knowledge and active discussion of the clinical significance of cancer genome alterations.




How to cite this record FAIRsharing.org: CIViC; Clinical Interpretation of Variants in Cancer; DOI: https://doi.org/10.25504/FAIRsharing.Yedluf; Last edited: March 21, 2019, 3:53 p.m.; Last accessed: May 20 2019 12:08 a.m.

Publication for citation  CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer. Griffith M,Spies NC,Krysiak K,McMichael JF,Coffman AC,Danos AM,Ainscough BJ,Ramirez CA,Rieke DT,Kujan L,Barnell EK,Wagner AH,Skidmore ZL,Wollam A,Liu CJ,Jones MR,Bilski RL,Lesurf R,Feng YY,Shah NM,Bonakdar M,Trani L,Matlock M,Ramu A,Campbell KM,Spies GC,Graubert AP,Gangavarapu K,Eldred JM,Larson DE,Walker JR,Good BM,Wu C,Su AI,Dienstmann R,Margolin AA,Tamborero D,Lopez-Bigas N,Jones SJ,Bose R,Spencer DH,Wartman LD,Wilson RK,Mardis ER,Griffith OL; Nat Genet ; 2017; 10.1038/ng.3774;


This record is maintained by malachig  ORCID

Record added: Feb. 22, 2019, 5:53 p.m.
Record updated: March 4, 2019, 1:53 p.m. by The FAIRsharing Team.

Show edit history


Support

General

Additional Information


Tools

    No tools defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Data Access


REST Web Services



Publications

CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer.

Griffith M,Spies NC,Krysiak K,McMichael JF,Coffman AC,Danos AM,Ainscough BJ,Ramirez CA,Rieke DT,Kujan L,Barnell EK,Wagner AH,Skidmore ZL,Wollam A,Liu CJ,Jones MR,Bilski RL,Lesurf R,Feng YY,Shah NM,Bonakdar M,Trani L,Matlock M,Ramu A,Campbell KM,Spies GC,Graubert AP,Gangavarapu K,Eldred JM,Larson DE,Walker JR,Good BM,Wu C,Su AI,Dienstmann R,Margolin AA,Tamborero D,Lopez-Bigas N,Jones SJ,Bose R,Spencer DH,Wartman LD,Wilson RK,Mardis ER,Griffith OL
Nat Genet 2017

View Paper (PubMed) View Publication

Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community-driven standards.

Danos AM,Ritter DI,Wagner AH,Krysiak K,Sonkin D,Micheel C,McCoy M,Rao S,Raca G,Boca SM,Roy A,Barnell EK,McMichael JF,Kiwala S,Coffman AC,Kujan L,Kulkarni S,Griffith M,Madhavan S,Griffith OL
Hum Mutat 2018

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

  • NIH (Government body)

Maintains

Grant Number(s)

  • U01CA20993601 (NIH)