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Pathogen-Host Interaction Data integration and Analysis System

Abbreviation:PHIDIAS

General Information

PHIDIAS is a web-based database and analysis system that aims to manually curate, computationally analyze, and address different scientific issues in the areas of pathogen-host interactions (PHI, or called host-pathogen interactions or HPI). PHIDIAS has emphasized the study of those pathogens that cause various infectious diseases in humans and animals. The recently published Victors analysis program is a relatively independent system within the PHIDIAS database and analysis resource.

Homepage http://www.phidias.us/index.php

Countries that developed this resource United States

Created in 2007

Taxonomic range

Bacteria

Brucella

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: PHIDIAS; Pathogen-Host Interaction Data integration and Analysis System; DOI: https://doi.org/10.25504/FAIRsharing.YmkBZX; Last edited: Feb. 13, 2020, 2:19 p.m.; Last accessed: Sep 25 2021 11:19 p.m.

Publication for citation PHIDIAS: a pathogen-host interaction data integration and analysis system. Xiang Z,Tian Y,He Y; Genome Biol ; 2007; 10.1186/gb-2007-8-7-r150;

This record is maintained by yongqunh

Record added: Oct. 24, 2019, 11:14 a.m.
Record updated: Feb. 3, 2020, 9:22 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.YmkBZX' by 'The FAIRsharing Team' at 09:22, 03 Feb 2020 (approved):

	'supportLinks' has been modified:
		Before:
			FAQ|http://www.phidias.us/faqs.php
			online documentation|http://www.phidias.us/contactUs.php
			online documentation|http://www.phidias.us/docs/docs.php
		After:
			FAQ|http://www.phidias.us/faqs.php
			online documentation|http://www.phidias.us/docs/docs.php
		Added:
		Removed:
			online documentation|http://www.phidias.us/contactUs.php

	'contactORCID' has been modified:
		Before: 
		After: 0000-0001-9189-9661

	'licences' has been modified:
		Before:
		After:
			PHIDIAS Disclaimer|http://www.phidias.us/disclaimer.php|Data
		Added:
			PHIDIAS Disclaimer|http://www.phidias.us/disclaimer.php|Data
		Removed:

	'onto_disciplines' has been modified:
		Before:
			Bioinformatics
			Biomedical Science
		After:
			Bioinformatics
			Biomedical Science
			Life Science
		Added:
			Life Science
		Removed:

	'onto_domains' has been modified:
		Before:
			host role
			infection process
			pathogen
		After:
			curated information
			host role
			infection process
			pathogen
		Added:
			curated information
		Removed:

	'contact' has been modified:
		Before: Dr. Yongqun "Oliver" He
		After: Yongqun "Oliver" He

	'dataProcesses' has been modified:
		Before:
			Victors Search
			Phinfo Search
			Browse Phinet
			Search HazARD
		After:
			Victors Search
			Phinfo Search
			Browse Phinet
			Search HazARD
			Gene Search
			BLAST
			Annotate Gene
			Submit
		Added:
			Gene Search
			BLAST
			Annotate Gene
			Submit
		Removed:

	'tools' has been modified:
		Before:
			Phigen||http://www.phidias.us/phigen/index.php
			Pacodom||http://www.phidias.us/pacodom/index.php
			BLAST||http://www.phidias.us/blast/index.php
		After:
			Pacodom||http://www.phidias.us/pacodom/index.php
		Added:
		Removed:
			Phigen||http://www.phidias.us/phigen/index.php
			BLAST||http://www.phidias.us/blast/index.php

Support

General

FAQ	FAQ
online documentation	Documentation

Additional Information

Contact

Yongqun "Oliver" He ORCID

Tools

Pacodom

http://www.phidias.us/pacodom/index.php

Access / Retrieve Data

Conditions of Use

Applies to: Data use

PHIDIAS Disclaimer

Data Curation

Annotate Gene	http://www.phidias.us/phigen/index.php
Submit	http://www.phidias.us/datasubmission/index.php

Data Access

Victors Search	http://www.phidias.us/victors/index.php
Phinfo Search	http://www.phidias.us/phinfo/index.php
Browse Phinet	http://www.phidias.us/phinet/index.php
Search HazARD	http://www.phidias.us/hazard/index.php
Gene Search	http://www.phidias.us/phigen/index.php
BLAST	http://www.phidias.us/blast/index.php

Publications

PHIDIAS: a pathogen-host interaction data integration and analysis system.

Xiang Z,Tian Y,He Y
Genome Biol 2007

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by yongqunh

Funds

University of Michigan, USA (University)
National Institutes of Health (NIH), Bethesda, MD, USA (Government body)

Maintains

He Group, University of Michigan Medical School, Ann Arbor, USA (Lab) Lead

Pathogen-Host Interaction Data integration and Analysis System

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