databases > DOI:10.25504/FAIRsharing.a08mtc
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ready ToxoDB

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General Information
ToxoDB is a free online resource that provides access to genomic and functional genomic data for Toxoplasma and related organisms. The resource contains over 30 fully sequenced and annotated genomes, with genomic sequence from multiple strains available for variant detection and copy number variation analysis. In addition to genomic sequence data, ToxoDB contains functional genomic datasets including microarray, RNAseq, proteomics, ChIP-seq, and phenotypic data. In addition, results from a number of whole-genome analyses are incorporated, including mapping to orthology clusters, which allows users to leverage phylogenetic relationships in their analyses.


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How to cite this record FAIRsharing.org: ToxoDB; ToxoDB; DOI: https://doi.org/10.25504/FAIRsharing.a08mtc; Last edited: March 1, 2021, 4:23 p.m.; Last accessed: Sep 16 2021 11:06 p.m.


Record updated: March 1, 2021, 4:16 p.m. by The FAIRsharing Team.

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Publications

ToxoDB: an integrated Toxoplasma gondii database resource.

Gajria B., Bahl A., Brestelli J., Dommer J., Fischer S., Gao X., Heiges M., Iodice J., Kissinger JC., Mackey AJ., Pinney DF., Roos DS., Stoeckert CJ., Wang H., Brunk BP.,
Nucleic Acids Res. 2008

View Paper (PubMed) View Publication

ToxoDB: Functional Genomics Resource for Toxoplasma and Related Organisms.

Harb OS,Roos DS
Methods Mol Biol 2019

View Paper (PubMed) View Publication

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Grant Number(s)

  • 212929/Z/18/Z (The Wellcome Trust, UK)

  • 218288/Z/19/Z (The Wellcome Trust, UK)

  • HHSN266200400037C (National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA)