databases > DOI:10.25504/FAIRsharing.a4ybgg

ready Indel Flanking Region Database

Abbreviation:IndelFR

General Information
Indel Flanking Region Database is an online resource for indels (insertion/deletions) and the flanking regions of proteins in SCOP superfamilies. It aims at providing a comprehensive dataset for analyzing the qualities of amino acid indels, substitutions and the relationship between them.

Homepage http://indel.bioinfo.sdu.edu.cn

Countries that developed this resource China

Created in 2011

Taxonomic range

Subjects 





How to cite this record FAIRsharing.org: IndelFR; Indel Flanking Region Database; DOI: https://doi.org/10.25504/FAIRsharing.a4ybgg; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 24 2021 7:31 p.m.


Record updated: Dec. 30, 2016, 11:54 a.m. by The FAIRsharing Team.

Show edit history



Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Release

yearly release No link recorded

Data Curation

manual curation No link recorded

Data Access

database match search http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=match
file download http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=download
SQL database dump No link recorded
database indel search http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=gap



Publications

Impact of indels on the flanking regions in structural domains.

Zhang Z., Huang J., Wang Z., Wang L., Gao P.,
Mol. Biol. Evol. 2011

View Paper (PubMed)

IndelFR: a database of indels in protein structures and their flanking regions.

Zhang Z,Xing C,Wang L,Gong B,Liu H
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Maintains

Grant Number(s)

  • 2009JC006 (Shangdong University, China)

  • 30970092 (National Natural Science Foundation of China (NSFC), Beijing, China)

  • 61070017 (National Natural Science Foundation of China (NSFC), Beijing, China)