databases > DOI:10.25504/FAIRsharing.a4ybgg

ready Indel Flanking Region Database

Abbreviation:IndelFR

General Information
Indel Flanking Region Database is an online resource for indels (insertion/deletions) and the flanking regions of proteins in SCOP superfamilies. It aims at providing a comprehensive dataset for analyzing the qualities of amino acid indels, substitutions and the relationship between them.

Homepage http://indel.bioinfo.sdu.edu.cn

Developed in China

Created in 2011

Taxonomic range

Subjects 





How to cite this record FAIRsharing.org: IndelFR; Indel Flanking Region Database; DOI: https://doi.org/10.25504/FAIRsharing.a4ybgg; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Apr 20 2019 6:06 p.m.


Record updated: Dec. 30, 2016, 11:54 a.m. by The FAIRsharing Team.

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Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Release

yearly release No link recorded

Data Curation

manual curation No link recorded

Data Access

database match search http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=match
file download http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=download
SQL database dump No link recorded
database indel search http://indel.bioinfo.sdu.edu.cn/gridsphere/gridsphere?cid=gap



Publications

Impact of indels on the flanking regions in structural domains.

Zhang Z., Huang J., Wang Z., Wang L., Gao P.,
Mol. Biol. Evol. 2011

View Paper (PubMed)

IndelFR: a database of indels in protein structures and their flanking regions.

Zhang Z,Xing C,Wang L,Gong B,Liu H
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

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Credit

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Funds

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Grant Number(s)

  • 2009JC006 (Shangdong University, China)

  • 30970092 (National Natural Science Foundation of China (NSFC), Beijing, China)

  • 61070017 (National Natural Science Foundation of China (NSFC), Beijing, China)