NCBI BioProject

Abbreviation:BioProject

Recommended

General Information

A BioProject is a collection of biological data related to a single initiative, originating from a single organization or from a consortium. A BioProject record provides users a single place to find links to the diverse data types generated for that project. The BioProject database is a searchable collection of complete and incomplete (in-progress) large-scale sequencing, assembly, annotation, and mapping projects for cellular organisms.

Homepage https://www.ncbi.nlm.nih.gov/bioproject/

Countries that developed this resource United States

Created in 2012

Taxonomic range

All

Knowledge Domains

Subjects

In the following recommendations:

Advanced Genetics

How to cite this record FAIRsharing.org: BioProject; NCBI BioProject; DOI: https://doi.org/10.25504/FAIRsharing.aqhv1y; Last edited: Feb. 8, 2021, 8:54 p.m.; Last accessed: Mar 05 2021 11:16 p.m.

Publication for citation BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata. Barrett T,Clark K,Gevorgyan R,Gorelenkov V,Gribov E,Karsch-Mizrachi I,Kimelman M,Pruitt KD,Resenchuk S,Tatusova T,Yaschenko E,Ostell J; Nucleic Acids Res ; 2011; 10.1093/nar/gkr1163;

Record added: June 24, 2015, 4:49 p.m.
Record updated: Feb. 8, 2021, 8:24 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.aqhv1y' by 'The FAIRsharing Team' at 20:24, 08 Feb 2021 (approved):

	'onto_domains' has been modified:
		Before:
			Annotation
			Experiment report
			Genome assembly
			data storage
			sequencing assay
		After:
			Annotation
			Experimental measurement
			Genome assembly
			data storage
			experimentally_determined
			sequencing assay
		Added:
			Experimental measurement
			experimentally_determined
		Removed:
			Experiment report

Edits to 'https://fairsharing.org/FAIRsharing.aqhv1y' by 'The FAIRsharing Team' at 13:56, 09 Mar 2020 (approved):

	'supportLinks' has been modified:
		Before:
			FAQ|http://www.ncbi.nlm.nih.gov/bioproject/docs/faq/
			help|http://www.ncbi.nlm.nih.gov/books/NBK54016/
			online documentation|http://www.ncbi.nlm.nih.gov/books/NBK169438/
		After:
			FAQ|https://www.ncbi.nlm.nih.gov/bioproject/docs/faq/
			help|https://www.ncbi.nlm.nih.gov/books/NBK54016
			online documentation|https://www.ncbi.nlm.nih.gov/books/NBK169438/
		Added:
			FAQ|https://www.ncbi.nlm.nih.gov/bioproject/docs/faq/
			help|https://www.ncbi.nlm.nih.gov/books/NBK54016
			online documentation|https://www.ncbi.nlm.nih.gov/books/NBK169438/
		Removed:
			FAQ|http://www.ncbi.nlm.nih.gov/bioproject/docs/faq/
			help|http://www.ncbi.nlm.nih.gov/books/NBK54016/
			online documentation|http://www.ncbi.nlm.nih.gov/books/NBK169438/

	'yearOfCreation' has been modified:
		Before: None
		After: 2012

	'onto_disciplines' has been modified:
		Before:
			Life Science
		After:
			Data Submission, Annotation and Curation
			Life Science
		Added:
			Data Submission, Annotation and Curation
		Removed:

	'dataProcesses' has been modified:
		Before:
			web interface
			FTP
			submit
		After:
			Browse
			FTP
			submit
		Added:
			Browse
		Removed:
			web interface

	'contact' has been modified:
		Before: General  Contact
		After: General Contact

	'onto_domains' has been modified:
		Before:
			Annotation
			sequencing assay
		After:
			Annotation
			Experiment report
			Genome assembly
			data storage
			sequencing assay
		Added:
			Experiment report
			Genome assembly
			data storage
		Removed:

	'homepage' has been modified:
		Before: http://www.ncbi.nlm.nih.gov/bioproject/
		After: https://www.ncbi.nlm.nih.gov/bioproject/

Edits to 'https://fairsharing.org/FAIRsharing.aqhv1y' by 'The FAIRsharing Team' at 14:47, 06 Jan 2017 (approved):

	'name' has been modified:
		Before: BioProject
		After: NCBI BioProject Added NCBI BioProject to policy F1000Research Data Policy.

Edits to 'https://fairsharing.org/FAIRsharing.aqhv1y' by 'The FAIRsharing Team' at 23:45, 19 Dec 2016 (approved):

	'name' has been modified:
		Before: NCBI BioProject
		After: BioProject

Support

General

FAQ	BioProject FAQ
help	NCBI Help Manual: BioProject
online documentation	BioProject Overview

Additional Information

Contact

General Contact

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

NCBI Data Policies and Disclaimer

Data Release

FTP	ftp://ftp.ncbi.nlm.nih.gov/bioproject/

Data Curation

submit

https://submit.ncbi.nlm.nih.gov/subs/bioproject/

Data Access

Browse

https://www.ncbi.nlm.nih.gov/bioproject/browse

Publications

BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.

Barrett T,Clark K,Gevorgyan R,Gorelenkov V,Gribov E,Karsch-Mizrachi I,Kimelman M,Pruitt KD,Resenchuk S,Tatusova T,Yaschenko E,Ostell J
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

BioProject XML Schema

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

Credit

Record Maintainer

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Funds

National Institutes of Health (NIH), Bethesda, MD, USA (Government body)

Maintains

National Center for Biotechnology Information (NCBI), Rockville, MD, USA (Government body) Lead

NCBI BioProject

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