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Enzyme Portal

General Information

The Enzyme Portal is for those interested in the biology of enzymes and proteins with enzymatic activity. It integrates publicly available information about enzymes, such as small-molecule chemistry, biochemical pathways and drug compounds. It contains enzyme-related information from resources developed at the EBI, and presents it via a unified user experience. The Enzyme Portal team does not curate enzyme information and therefore is a secondary information resource or portal.

Homepage http://www.ebi.ac.uk/enzymeportal/

Countries that developed this resource Austria , Belgium , Croatia , Czech Republic , Denmark , Finland , France , Germany , Greece , Hungary , Iceland , Israel , Italy , Lithuania , Luxembourg , Malta , Montenegro , Netherlands , Norway , Portugal , Republic of Ireland , Slovakia , Spain , Sweden , Switzerland , United Kingdom

Created in 2012

Taxonomic range

Arabidopsis thaliana

Bacillus subtilis

Bos taurus

Caenorhabditis elegans

Danio rerio

Dictyostelium discoideum

Drosophila melanogaster

Escherichia coli

Homo sapiens

Mus musculus

Mycobacterium tuberculosis

Oryza sativa L. ssp. japonica

Rattus norvegicus

Saccharomyces cerevisiae

Schizosaccharomyces pombe

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: Enzyme Portal; Enzyme Portal; DOI: https://doi.org/10.25504/FAIRsharing.bcdtjc; Last edited: April 26, 2021, 4:07 p.m.; Last accessed: Sep 25 2021 9:47 p.m.

This record is maintained by joseph

Record added: March 13, 2017, 2:42 p.m.
Record updated: April 16, 2021, 2:29 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.bcdtjc' by 'The FAIRsharing Team' at 14:29, 16 Apr 2021 (approved):

	'organizations' has been modified:
		Before:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Undefined
		After:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
		Added:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
		Removed:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Undefined

	'supportLinks' has been modified:
		Before:
			FAQ|https://www.ebi.ac.uk/enzymeportal/faq
			contact form|https://www.ebi.ac.uk/support/index.php?query=Enzyme+portal
			online documentation|https://github.com/uniprot/enzymeportal
			online documentation|https://www.ebi.ac.uk/enzymeportal/about
			tess training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour
			twitter|@enzymeportal
		After:
			FAQ|https://www.ebi.ac.uk/enzymeportal/faq
			TeSS training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour
			contact form|https://www.ebi.ac.uk/support/index.php?query=Enzyme+portal
			online documentation|https://github.com/uniprot/enzymeportal
			online documentation|https://www.ebi.ac.uk/enzymeportal/about
			twitter|@enzymeportal
		Added:
			TeSS training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour
		Removed:
			tess training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour

Edits to 'https://fairsharing.org/FAIRsharing.bcdtjc' by 'The FAIRsharing Team' at 15:15, 12 Feb 2020 (approved):

	'related_databases' has been modified:
		Before:
			UniProt Knowledgebase
		After:
			ChEMBL
			Rhea
			Integrated relational Enzyme database
			Protein Data Bank in Europe
			Reactome - a curated knowledgebase of biological pathways
			UniProt Knowledgebase
			Online Mendelian Inheritance in Man
			Mechanism and Catalytic Site Atlas
		Added:
			ChEMBL
			Rhea
			Integrated relational Enzyme database
			Protein Data Bank in Europe
			Reactome - a curated knowledgebase of biological pathways
			Online Mendelian Inheritance in Man
			Mechanism and Catalytic Site Atlas
		Removed:

	'supportLinks' has been modified:
		Before:
			online documentation|https://github.com/uniprot/enzymeportal
			training|http://www.ebi.ac.uk/training/online/course/enzyme-portal-quick-tour
		After:
			FAQ|https://www.ebi.ac.uk/enzymeportal/faq
			contact form|https://www.ebi.ac.uk/support/index.php?query=Enzyme+portal
			online documentation|https://github.com/uniprot/enzymeportal
			online documentation|https://www.ebi.ac.uk/enzymeportal/about
			tess training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour
			twitter|@enzymeportal
		Added:
			FAQ|https://www.ebi.ac.uk/enzymeportal/faq
			contact form|https://www.ebi.ac.uk/support/index.php?query=Enzyme+portal
			online documentation|https://www.ebi.ac.uk/enzymeportal/about
			tess training|https://tess.elixir-europe.org/materials/enzyme-portal-quick-tour
			twitter|@enzymeportal
		Removed:
			training|http://www.ebi.ac.uk/training/online/course/enzyme-portal-quick-tour

	'description' has been modified:
		Before: The Enzyme Portal integrates publicly available information about enzymes, such as small-molecule chemistry, biochemical pathways and drug compounds.
		After: The Enzyme Portal is for those interested in the biology of enzymes and proteins with enzymatic activity. It integrates publicly available information about enzymes, such as small-molecule chemistry, biochemical pathways and drug compounds. It contains enzyme-related information from resources developed at the EBI, and presents it via a unified user experience. The Enzyme Portal team does not curate enzyme information and therefore is a secondary information resource or portal.

	'countries' has been modified:
		Before:
			European Union
			United Kingdom
		After:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
			United Kingdom
		Added:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
		Removed:
			European Union

	'onto_disciplines' has been modified:
		Before:
			Biochemistry
			Life Science
		After:
			Biochemistry
			Enzymology
		Added:
			Enzymology
		Removed:
			Life Science

	'onto_domains' has been modified:
		Before:
			disease
			drug
			enzyme
			pathway
			small molecule
		After:
			catalytic activity
			disease
			drug
			enzyme
			pathway
			small molecule
		Added:
			catalytic activity
		Removed:

	'miriam_id' has been modified:
		Before: None
		After: 

	'dataProcesses' has been modified:
		Before:
			browse by enzyme
			browse by disease
			browse by taxonomy
			browse by pathway
			search
		After:
			Browse by Enzyme
			Browse by Disease
			Browse by Taxonomy
			Browse by Pathway
			Search
			Browse by Enzyme Families
			Browse by Cofactors
		Added:
			Browse by Enzyme
			Browse by Disease
			Browse by Taxonomy
			Browse by Pathway
			Search
			Browse by Enzyme Families
			Browse by Cofactors
		Removed:
			browse by enzyme
			browse by disease
			browse by taxonomy
			browse by pathway
			search

	'tools' has been modified:
		Before:
		After:
			Transform-MinER||https://www.ebi.ac.uk/thornton-srv/transform-miner/
			NCBI BLAST+||https://www.ebi.ac.uk/Tools/services/web/toolform.ebi?tool=ncbiblast&database=enzymeportal
		Added:
			Transform-MinER||https://www.ebi.ac.uk/thornton-srv/transform-miner/
			NCBI BLAST+||https://www.ebi.ac.uk/Tools/services/web/toolform.ebi?tool=ncbiblast&database=enzymeportal
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.bcdtjc' by 'The FAIRsharing Team' at 13:53, 17 Mar 2017 (approved):

	'contactName' has been modified:
		Before:
			
		After:
			Joseph Onwubiko
		Added:
		Removed:

In Collections

EOSC-Life

Support

General

FAQ	FAQ
contact form	Feedback Form
online documentation	GitHub Project & Docs
online documentation	About
twitter	@enzymeportal

Additional Information

Contact

Joseph Onwubiko

TeSS training resources

Enzyme Portal: Quick tour

Tools

Transform-MinER	https://www.ebi.ac.uk/thornton-srv/transform-miner/
NCBI BLAST+	https://www.ebi.ac.uk/Tools/services/web/toolform.ebi?tool=ncbiblast&d ...

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

Browse by Enzyme	https://www.ebi.ac.uk/enzymeportal/browse/enzymes
Browse by Disease	https://www.ebi.ac.uk/enzymeportal/browse/disease
Browse by Taxonomy	https://www.ebi.ac.uk/enzymeportal/browse/taxonomy
Browse by Pathway	https://www.ebi.ac.uk/enzymeportal/browse/pathways
Search	http://www.ebi.ac.uk/enzymeportal/
Browse by Enzyme Families	https://www.ebi.ac.uk/enzymeportal/browse/families
Browse by Cofactors	https://www.ebi.ac.uk/enzymeportal/browse/cofactors

Publications

The EBI enzyme portal.

Alcantara R,Onwubiko J,Cao H,Matos Pd,Cham JA,Jacobsen J,Holliday GL,Fischer JD,Rahman SA,Jassal B,Goujon M,Rowland F,Velankar S,Lopez R,Overington JP,Kleywegt GJ,Hermjakob H,O'Donovan C,Martin MJ,Thornton JM,Steinbeck C
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Chemical Entities of Biological Interest

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by joseph

Funds

European Commission under FP7 Grant Agreement (Government body)

Enzyme Portal

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