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ready Physiome Model Repository


General Information
The Physiome Model Repository (PMR) is the main online repository for the IUPS Physiome Project, providing version and access controlled repositories, called workspaces, for users to store their data. PMR also provides a mechanism to create persistent access to specific revisions of a workspace, termed exposures. Exposure plugins are available for specific types of data (e.g., CellML or FieldML documents) which enable customizable views of the data when browsing the repository via a web browser, or an application accessing the repository’s content via web services.

How to cite this record PMR; Physiome Model Repository; DOI:; Last edited: June 23, 2021, 1:10 p.m.; Last accessed: Dec 07 2021 8:29 p.m.

This record is maintained by andre  ORCID

Record added: Jan. 22, 2016, 3:31 a.m.
Record updated: June 23, 2021, 11:21 a.m. by The FAIRsharing Team.

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REST Web Services


The Physiome Model Repository 2.

Yu T,Lloyd CM,Nickerson DP,Cooling MT,Miller AK,Garny A,Terkildsen JR,Lawson J,Britten RD,Hunter PJ,Nielsen PM
Bioinformatics 2011

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Revision history aware repositories of computational models of biological systems.

Miller AK,Yu T,Britten R,Cooling MT,Lawson J,Cowan D,Garny A,Halstead MD,Hunter PJ,Nickerson DP,Nunns G,Wimalaratne SM,Nielsen PM
BMC Bioinformatics 2011

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CellML metadata standards, associated tools and repositories.

Beard DA,Britten R,Cooling MT,Garny A,Halstead MD,Hunter PJ,Lawson J,Lloyd CM,Marsh J,Miller A,Nickerson DP,Nielsen PM,Nomura T,Subramanium S,Wimalaratne SM,Yu T
Philos Trans A Math Phys Eng Sci 2009

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The CellML Model Repository.

Lloyd CM,Lawson JR,Hunter PJ,Nielsen PF
Bioinformatics 2008

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Toward a curated CellML model repository.

Nickerson D,Stevens C,Halstead M,Hunter P,Nielsen P
Conf Proc IEEE Eng Med Biol Soc 2007

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The Human Physiome: how standards, software and innovative service infrastructures are providing the building blocks to make it achievable.

Nickerson D,Atalag K,de Bono B,Geiger J,Goble C,Hollmann S,Lonien J,Muller W,Regierer B,Stanford NJ,Golebiewski M,Hunter P
Interface Focus 2016

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