Measurement Method Ontology
Abbreviation: MMO
Homepage http://rgd.mcw.edu/rgdweb/ontology/view.html?acc_id=MMO:0000000
Countries that developed this resource United States
Created in 2011
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: MMO; Measurement Method Ontology; DOI: https://doi.org/10.25504/FAIRsharing.bgkyd7; Last edited: Aug. 8, 2019, 10:46 a.m.; Last accessed: Apr 22 2021 11:59 p.m.
Record updated: July 13, 2019, 7:14 p.m. by The FAIRsharing Team.
contact form | http://rgd.mcw.edu/contact/index.shtml |
help | http://rgd.mcw.edu/wg/help3/data/ontolog ... |
online documentation | http://sourceforge.net/projects/phenoont ... |
@ratgenome |
Additional Information
Contact | Mary Shimoyama ORCID |
External Links
Bioportal | http://bioportal.bioontology.org/ontologies/MMO |
OBO | http://obofoundry.org/ontology/mmo.html |
No XSD schemas defined
Conditions of Use
Data Access
RGD Ontology Browse and Search | http://rgd.mcw.edu/rgdweb/ontology/search.html |
Three ontologies to define phenotype measurement data.
Shimoyama M,Nigam R,McIntosh LS,Nagarajan R,Rice T,Rao DC,Dwinell MR
Front Genet 2012
The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications.
Smith JR,Park CA,Nigam R,Laulederkind SJ,Hayman GT,Wang SJ,Lowry TF,Petri V,Pons JD,Tutaj M,Liu W,Worthey EA,Shimoyama M,Dwinell MR
J Biomed Semantics 2013
View in BioPortal.
View in OBO Foundry.
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
The Rat Genome Database stores genetic, genomic, phenotype, and disease data generated from rat research. It provides access to corresponding data for eight other species, allowing cross-species comparison. Data curation is performed both manually and via an automated pipeline, giving RGD users integrated access to a wide variety of data to support their research.
Alliance of Genome Resources
The primary mission of the Alliance of Genome Resources (the Alliance) is to develop and maintain sustainable genome information resources that facilitate the use of diverse model organisms in understanding the genetic and genomic basis of human biology, health and disease.
Animal Quantitative Trait Loci (QTL) Database
The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. QTL (phenotype/expression, eQTL), candidate gene and association data (GWAS), and copy number variations (CNV) mapped to livestock animal genomes, in order to facilitate locating and comparing discoveries within and between species. New data and database tools are continually developed to align various trait mapping data to map-based genome features such as annotated genes.
OBO Foundry
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
This record is not implemented by any policy.
Record Maintainer
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Funds
U.S. National Library of Medicine (Government body)
National Heart, Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
Maintains
Rat Genome Database (Consortium)
Grant Number(s)
HL094271 (National Heart, Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA)
R01HL064541 (National Institutes of Health (NIH), Bethesda, MD, USA)
R01HL094271 (National Institutes of Health (NIH), Bethesda, MD, USA)
R01HL094286 (National Institutes of Health (NIH), Bethesda, MD, USA)