databases > DOI:10.25504/FAIRsharing.bp5hpt
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ready Phenomics of yeast Mutants

Abbreviation:PhenoM

General Information
PhenoM (Phenomics of yeast Mutants) stores, retrieves, visualises and data mines the quantitative single-cell measurements extracted from micrographs of temperature-sensitive mutant cells. PhenoM allows users to rapidly search and retrieve raw images and their quantified morphological data for genes of interest. The database also provides several data-mining tools, including a PhenoBlast module for phenotypic comparison between mutant strains and a Gene Ontology module for functional enrichment analysis of gene sets showing similar morphological alterations.

Homepage http://phenom.ccbr.utoronto.ca/

Countries that developed this resource Canada

Created in 2011





How to cite this record FAIRsharing.org: PhenoM; Phenomics of yeast Mutants; DOI: https://doi.org/10.25504/FAIRsharing.bp5hpt; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jul 06 2020 6:39 p.m.


Record updated: Sept. 26, 2016, 11:25 a.m. by The FAIRsharing Team.

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Support

General

help http://phenom.ccbr.utoronto.ca/help.jsp

Additional Information

Contact Brenda Andrews

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Release

ad-hoc release No link recorded

Data Curation

manual curation No link recorded

Data Access

file download(tab-delimited,images) http://phenom.ccbr.utoronto.ca/download.jsp
search http://phenom.ccbr.utoronto.ca/index.jsp



Publications

Systematic exploration of essential yeast gene function with temperature-sensitive mutants.

Li Z., Vizeacoumar FJ., Bahr S., Li J., Warringer J., Vizeacoumar FS., Min R., Vandersluis B., Bellay J., Devit M., Fleming JA., Stephens A., Haase J., Lin ZY., Baryshnikova A., Lu H., Yan Z., Jin K., Barker S., Datti A., Giaever G., Nislow C., Bulawa C., Myers CL., Costanzo M., Gingras AC., Zhang Z., Blomberg A., Bloom K., Andrews B., Boone C.,
Nat. Biotechnol. 2011

View Paper (PubMed) View Publication

PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae.

Jin K,Li J,Vizeacoumar FS,Li Z,Min R,Zamparo L,Vizeacoumar FJ,Datti A,Andrews B,Boone C,Zhang Z
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

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Funds

Maintains

Grant Number(s)

  • 2004-OGI-3-01 (Ontario Genomics Institute/Genome Canada)

  • MOP-97939 (Canadian Institutes of Health Research (CIHR))