Aphid Genomics Database

Abbreviation:AphidBase

General Information

The Aphid Genome Database's aim is to improve the current pea aphid genome assembly and annotation, and to provide new aphid genome sequences as well as tools for analysis of these genomes.

Homepage http://www.aphidbase.com/

Countries that developed this resource France

Created in 2006

Taxonomic range

Aphididae

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: AphidBase; Aphid Genomics Database; DOI: https://doi.org/10.25504/FAIRsharing.cb05hf; Last edited: April 26, 2021, 9:33 a.m.; Last accessed: May 18 2021 6:22 a.m.

Record updated: April 20, 2021, 2:50 p.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.cb05hf' by 'The FAIRsharing Team' at 14:50, 20 Apr 2021 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.cb05hf' by 'The FAIRsharing Team' at 10:56, 16 Apr 2021 (approved):

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			ProDom Team|http://prodom.prabi.fr/prodom/current/html/prodom_team.php|Maintains
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			ProDom Team|http://prodom.prabi.fr/prodom/current/html/prodom_team.php|Maintains
			United States Department of Agriculture, Agricultural Research Service (USDA-ARS)|http://www.ars.usda.gov|Funds
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			United States Department of Agriculture, Agricultural Research Service (USDA-ARS)|http://www.ars.usda.gov|Funds
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Edits to 'https://fairsharing.org/FAIRsharing.cb05hf' by 'The FAIRsharing Team' at 11:58, 22 Sep 2016 (approved):

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		Before: Aphidbase: an aphid genomics database
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Support

General

Mailing List

None

Additional Information

Contact

Fabrice Legeai

Tools

BLAST

http://tools.genouest.org/tools/genouestsf/aphidblast.php/en/

Access / Retrieve Data

Conditions of Use

Data Access

Browse

http://bipaa.genouest.org/is/aphidbase/

Publications

AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome.

Legeai F., Shigenobu S., Gauthier JP., Colbourne J., Rispe C., Collin O., Richards S., Wilson AC., Murphy T., Tagu D.,
Insect Mol. Biol. 2010

View Paper (PubMed) View Publication

AphidBase: a database for aphid genomic resources.

Gauthier JP,Legeai F,Zasadzinski A,Rispe C,Tagu D
Bioinformatics 2007

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Gene Ontology

Models and Formats

FASTA Sequence Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

No related databases defined

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

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Funds

United States Department of Agriculture, Agricultural Research Service (USDA-ARS) (Government body)

Maintains

ProDom Team

Grant Number(s)

2007-04628 (United States Department of Agriculture, Agricultural Research Service (USDA-ARS))

Aphid Genomics Database

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