BLAST-like Alignment Tool Format
Abbreviation: BLAT Format
Homepage http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#BLATAlign
Countries that developed this resource United States
Created in 2001
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: BLAT Format; BLAST-like Alignment Tool Format; DOI: https://doi.org/10.25504/FAIRsharing.chmyvk; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Dec 05 2020 5:50 a.m.
Record updated: Oct. 22, 2016, 7:07 p.m. by The FAIRsharing Team.
| FAQ | http://genome.ucsc.edu/FAQ/FAQblat.html |
| online documentation | http://genome.ucsc.edu/FAQ/FAQblat.html# ... |
Additional Information
| Contact | W James Kent |
External Links
| Bioportal | http://bioportal.bioontology.org/ontologies/BLATFormat |
| OBO | http://obofoundry.org/ontology/blatformat.html |
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Genome assemblies and aligned annotations for a wide range of vertebrates and model organisms, along with an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic datasets.
The UCSC Archaeal Genome Browser
The UCSC Archaeal Genome Browser is a window on the biology of more than 100 microbial species from the domain Archaea. Basic gene annotation is derived from NCBI Genbank/RefSeq entries, with overlays of sequence conservation across multiple species, nucleotide and protein motifs, non-coding RNA predictions, operon predictions, and other types of bioinformatic analyses. In addition, we display available gene expression data (microarray or high-throughput RNA sequencing). Direct contributions or notices of publication of functional genomic data or bioinformatic analyses from archaeal research labs are very welcome.
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