BLAST-like Alignment Tool Format
Abbreviation: BLAT Format
Homepage http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#BLATAlign
Countries that developed this resource United States
Created in 2001
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: BLAT Format; BLAST-like Alignment Tool Format; DOI: https://doi.org/10.25504/FAIRsharing.chmyvk; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: May 17 2021 11:25 a.m.
Record updated: Oct. 22, 2016, 7:07 p.m. by The FAIRsharing Team.
| FAQ | http://genome.ucsc.edu/FAQ/FAQblat.html |
| online documentation | http://genome.ucsc.edu/FAQ/FAQblat.html# ... |
Additional Information
| Contact | W James Kent |
External Links
| Bioportal | http://bioportal.bioontology.org/ontologies/BLATFormat |
| OBO | http://obofoundry.org/ontology/blatformat.html |
No XSD schemas defined
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Genome assemblies and aligned annotations for a wide range of vertebrates and model organisms, along with an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic datasets.
The UCSC Archaeal Genome Browser
The UCSC Archaeal Genome Browser is a window on the biology of more than 100 microbial species from the domain Archaea. Basic gene annotation is derived from NCBI Genbank/RefSeq entries, with overlays of sequence conservation across multiple species, nucleotide and protein motifs, non-coding RNA predictions, operon predictions, and other types of bioinformatic analyses. In addition, we display available gene expression data (microarray or high-throughput RNA sequencing). Direct contributions or notices of publication of functional genomic data or bioinformatic analyses from archaeal research labs are very welcome.
This record is not implemented by any policy.
Record Maintainer
This record is in need of a maintainer. If you login, you'll be able to claim this record.
Maintains
