standards > terminology artifact > DOI:10.25504/FAIRsharing.czzmpg


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ready Wheat Trait Ontology

Abbreviation: CO_321


General Information
This ontology defines traits of the International Wheat Information System (IWIS) database and wheat descriptor. The Wheat Trait Ontology is part of the Crop Ontology (CO) project. The Crop Ontology has been created to compile validated concepts along with their inter-relationships on anatomy, structure and phenotype of Crops, on trait measurement and methods as well as on Germplasm with the multi-crop passport terms. The concepts of the CO are being used to curate agronomic databases and describe the data. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases is important in comparative phenotypic and genotypic studies across species and gene-discovery experiments as it provides harmonized description of the data and therefore facilitates the retrieval of information.



How to cite this record FAIRsharing.org: CO_321; Wheat Trait Ontology; DOI: https://doi.org/10.25504/FAIRsharing.czzmpg; Last edited: Sept. 4, 2018, 11:14 a.m.; Last accessed: Nov 21 2018 11:31 a.m.


Record updated: Sept. 4, 2018, 11:14 a.m. by The FAIRsharing Team.

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General

Additional Information

External Links


Tools

    No tools defined


Schemas

No XSD schemas defined




Publications

Multifunctional crop trait ontology for breeders' data: field book, annotation, data discovery and semantic enrichment of the literature.

Shrestha R,Arnaud E,Mauleon R,Senger M,Davenport GF,Hancock D,Morrison N,Bruskiewich R,McLaren G
AoB Plants 2010

View Paper (PubMed) View Publication

CO-WHEAT Ontology Display

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Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Identifier Schemas

No identifier schema standards defined


Implementing Databases (1)
AgroPortal
The AgroPortal project reuses the biomedical domain’s semantic tools and insights to serve agronomy, but also food, plant, agriculture and biodiversity sciences. We offer a portal that features ontology hosting, search, versioning, visualization, comment, and recommendation; enables semantic annotation; stores and exploits ontology alignments; and enables interoperation with the semantic web. The AgroPortal specifically satisfies requirements of the agronomy community in terms of ontology formats (e.g., SKOS vocabularies and trait dictionaries) and supported features (offering detailed metadata and advanced annotation capabilities). The AgroPortal content is automatically retrieved by FAIRsharing.org (https://fairsharing.org/) and the Agrisemantics Map of Data Standards (http://vest.agrisemantics.org/).

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Grant Number(s)

  • EU Framework 6 ActinoGEN project (EU Framework 6 ActinoGEN project)

  • F3/G13/18/04 (NERC Environmental Bioinformatics Centre)

  • G4005.22 (Generation Challenge Programme, Mexico)

  • G4009-03 (Generation Challenge Programme, Mexico)