IntAct molecular interaction database
Abbreviation:IntAct
Homepage http://www.ebi.ac.uk/intact
Countries that developed this resource Austria , Belgium , Croatia , Czech Republic , Denmark , Finland , France , Germany , Greece , Hungary , Iceland , Israel , Italy , Lithuania , Luxembourg , Malta , Montenegro , Netherlands , Norway , Portugal , Republic of Ireland , Slovakia , Spain , Sweden , Switzerland , United Kingdom
Created in 2003
Taxonomic range
Knowledge Domains
Subjects
User-defined Tags
How to cite this record FAIRsharing.org: IntAct; IntAct molecular interaction database; DOI: https://doi.org/10.25504/FAIRsharing.d05nwx; Last edited: April 8, 2020, 5:13 p.m.; Last accessed: Jan 17 2021 6:10 a.m.
Publication for citation The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Orchard S,Ammari M,Aranda B,Breuza L,Briganti L,Broackes-Carter F,Campbell NH,Chavali G,Chen C,del-Toro N,Duesbury M,Dumousseau M,Galeota E,Hinz U,Iannuccelli M,Jagannathan S,Jimenez R,Khadake J,Lagreid A,Licata L,Lovering RC,Meldal B,Melidoni AN,Milagros M,Peluso D,Perfetto L,Porras P,Raghunath A,Ricard-Blum S,Roechert B,Stutz A,Tognolli M,van Roey K,Cesareni G,Hermjakob H; Nucleic Acids Res ; 2013; 10.1093/nar/gkt1115;
Record updated: April 8, 2020, 4:54 p.m. by The FAIRsharing Team.
FAQ | http://www.ebi.ac.uk/intact/pages/faq/fa ... |
contact form | IntAct Contact Form |
online documentation | Dataset Information |
training | Training |
@intact_project |
Additional Information
Contact | Sandra Orchard ORCID |
TeSS training resources
Intact the molecular interactions database at embl ebi webinar
Intact molecular interactions at embl ebi
Cytoscape | http://wiki.cytoscape.org/Cytoscape_User_Manual/ImportingNetworksFromW ... |
PSI-MI Semantic Validator | http://www.ebi.ac.uk/intact/validator |
Conditions of Use
Applies to: Data useData Curation
Manual curation | https://www.ebi.ac.uk/intact/resources/curation_manual |
Submit | https://www.ebi.ac.uk/intact/submission |
Data Access
RDF export | No link recorded |
Download | https://www.ebi.ac.uk/intact/downloads |
Search | https://www.ebi.ac.uk/intact/search |
Browse | http://www.ebi.ac.uk/ontology-lookup/?termId=MI:0469 |
REST Web Services
RESTful services | http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices |
SOAP Web Services
SOAP services | http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices |
The IntAct molecular interaction database in 2010.
Aranda B., Achuthan P., Alam-Faruque Y., Armean I., Bridge A., Derow C., Feuermann M., Ghanbarian AT., Kerrien S., Khadake J., Kerssemakers J., Leroy C., Menden M., Michaut M., Montecchi-Palazzi L., Neuhauser SN., Orchard S., Perreau V., Roechert B., van Eijk K., Hermjakob H.,
Nucleic Acids Res. 2010
Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions.
Kerrien S., Orchard S., Montecchi-Palazzi L., Aranda B., Quinn AF., Vinod N., Bader GD., Xenarios I., Wojcik J., Sherman D., Tyers M., Salama JJ., Moore S., Ceol A., Chatr-Aryamontri A., Oesterheld M., Stümpflen V., Salwinski L., Nerothin J., Cerami E., Cusick ME., Vidal M., Gilson M., Armstrong J., Woollard P., Hogue C., Eisenberg D., Cesareni G., Apweiler R., Hermjakob H.,
BMC Biol. 2007
PSICQUIC and PSISCORE: accessing and scoring molecular interactions.
Aranda B., Blankenburg H., Kerrien S., Brinkman FS., Ceol A., Chautard E., Dana JM., De Las Rivas J., Dumousseau M., Galeota E., Gaulton A., Goll J., Hancock RE., Isserlin R., Jimenez RC., Kerssemakers J., Khadake J., Lynn DJ., Michaut M., O'Kelly G., Ono K., Orchard S., Prieto C., Razick S., Rigina O., Salwinski L., Simonovic M., Velankar S., Winter A., Wu G., Bader GD., Cesareni G., Donaldson IM., Eisenberg D., Kleywegt GJ., Overington J., Ricard-Blum S., Tyers M., Albrecht M., Hermjakob H.,
Nat. Methods 2011
IntAct: an open source molecular interaction database.
Hermjakob H., Montecchi-Palazzi L., Lewington C., Mudali S., Kerrien S., Orchard S., Vingron M., Roechert B., Roepstorff P., Valencia A., Margalit H., Armstrong J., Bairoch A., Cesareni G., Sherman D., Apweiler R.,
Nucleic Acids Res. 2004
The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases.
Orchard S,Ammari M,Aranda B,Breuza L,Briganti L,Broackes-Carter F,Campbell NH,Chavali G,Chen C,del-Toro N,Duesbury M,Dumousseau M,Galeota E,Hinz U,Iannuccelli M,Jagannathan S,Jimenez R,Khadake J,Lagreid A,Licata L,Lovering RC,Meldal B,Melidoni AN,Milagros M,Peluso D,Perfetto L,Porras P,Raghunath A,Ricard-Blum S,Roechert B,Stutz A,Tognolli M,van Roey K,Cesareni G,Hermjakob H
Nucleic Acids Res 2013
Reporting Guidelines
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
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Record Maintainer
This record is maintained by orchard
Funds
National Center for Research Resources, National Institutes of Health, Bethesda, MD, USA (Government body)
National Institute of General Medical Sciences (NIGMS), Bethesda, MD, USA (Government body)
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
Maintains
Swiss Institute of Bioinformatics (SIB), Switzerland (Research institute)
European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK (Research institute) Lead
Grant Number(s)
BBSRC MIDAS grant (BB/L024179/1) (Biotechnology and Biological Sciences Research Council (BBSRC), UK)