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ProtClustDB

General Information

ProtClustDB is a collection of related protein sequences (clusters) consisting of Reference Sequence proteins encoded by complete genomes. This database contains both curated and non-curated clusters.

Homepage http://www.ncbi.nlm.nih.gov/proteinclusters

Countries that developed this resource United States

Created in 2007

Taxonomic range

All

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: ProtClustDB; ProtClustDB; DOI: https://doi.org/10.25504/FAIRsharing.da493y; Last edited: June 15, 2021, 1:42 p.m.; Last accessed: Sep 27 2021 6:12 a.m.

Record updated: April 20, 2021, 1:27 p.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.da493y' by 'The FAIRsharing Team' at 13:27, 20 Apr 2021 (approved):

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Edits to 'https://fairsharing.org/FAIRsharing.da493y' by 'The FAIRsharing Team' at 11:57, 04 Oct 2016 (approved):

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In Collections

RDA Covid-19 WG Resources

Support

General

FAQ	https://www.ncbi.nlm.nih.gov/proteinclus ...
help	http://www.ncbi.nlm.nih.gov/books/NBK379 ...

Additional Information

Contact

General Contact

Tools

BLAST

http://www.ncbi.nlm.nih.gov/genomes/prokhits.cgi

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

Download

ftp://ftp.ncbi.nih.gov/genomes/CLUSTERS/

Publications

The National Center for Biotechnology Information's Protein Clusters Database.

Klimke W., Agarwala R., Badretdin A., Chetvernin S., Ciufo S., Fedorov B., Kiryutin B., O'Neill K., Resch W., Resenchuk S., Schafer S., Tolstoy I., Tatusova T.,
Nucleic Acids Res. 2009

View Paper (PubMed)

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

FASTA Sequence Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

No related databases defined

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

National Institutes of Health (NIH), Bethesda, MD, USA (Government body)

Maintains

National Center for Biotechnology Information (NCBI), Rockville, MD, USA (Government body)

ProtClustDB

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