IPD-IMGT/HLA - Human Leukocyte Antigen Sequence Database

Abbreviation:IPD-IMGT/HLA

General Information

The IPD-IMGT/HLA Database provides a specialist database for sequences of the human major histocompatibility complex (MHC) and includes the official sequences named by the WHO Nomenclature Committee For Factors of the HLA System. The IMGT/HLA Database was established to provide a locus-specific database (LSDB) for the allelic sequences of the genes in the HLA system, also known as the human MHC. The IMGT/HLA Database was first released in 1998 and subsequently incorporated as a module of IPD in 2012.

Homepage http://www.ebi.ac.uk/ipd/imgt/hla/

Countries that developed this resource Austria , Belgium , Croatia , Czech Republic , Denmark , Finland , France , Germany , Greece , Hungary , Iceland , Israel , Italy , Lithuania , Luxembourg , Malta , Montenegro , Netherlands , Norway , Portugal , Republic of Ireland , Slovakia , Spain , Sweden , Switzerland , United Kingdom

Created in 1998

Taxonomic range

Homo sapiens

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: IPD-IMGT/HLA; IPD-IMGT/HLA - Human Leukocyte Antigen Sequence Database; DOI: https://doi.org/10.25504/FAIRsharing.e28v7g; Last edited: Feb. 21, 2020, 2:01 p.m.; Last accessed: Oct 24 2020 1:34 p.m.

Publication for citation The IPD and IMGT/HLA database: allele variant databases. Robinson J,Halliwell JA,Hayhurst JD,Flicek P,Parham P,Marsh SG; Nucleic Acids Res ; 2014; 10.1093/nar/gku1161;

This record is maintained by jamesran

Record updated: Feb. 21, 2020, 1:52 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'The FAIRsharing Team' at 13:52, 21 Feb 2020 (approved):

	'countries' has been modified:
		Before:
			United Kingdom
		After:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
			United Kingdom
		Added:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'jamesran' at 11:26, 21 Feb 2020 (approved):

	'name' has been modified:
		Before: ImMunoGeneTics Human Leukocyte Antigen Sequence Database
		After: IPD-IMGT/HLA - Human Leukocyte Antigen Sequence Database

	'countries' has been modified:
		Before:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
			United Kingdom
		After:
			United Kingdom
		Added:
		Removed:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'The FAIRsharing Team' at 18:13, 10 Feb 2020 (approved):

	'supportLinks' has been modified:
		Before:
			FAQ|http://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
			contact form|http://www.ebi.ac.uk/support/hla.php
			email|hla@alleles.org
			help|https://www.ebi.ac.uk/ipd/imgt/hla/access.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/nomenclature/index.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/dpb.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/intro.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/citations.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/stats.html
		After:
			FAQ|https://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
			contact form|http://www.ebi.ac.uk/support/hla.php
			help|https://www.ebi.ac.uk/ipd/imgt/hla/access.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/nomenclature/index.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/dpb.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/intro.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/citations.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/stats.html
		Added:
			FAQ|https://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
		Removed:
			FAQ|http://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
			email|hla@alleles.org

	'countries' has been modified:
		Before:
			United Kingdom
		After:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
			United Kingdom
		Added:
			Austria
			Belgium
			Croatia
			Czech Republic
			Denmark
			Finland
			France
			Germany
			Greece
			Hungary
			Iceland
			Israel
			Italy
			Lithuania
			Luxembourg
			Malta
			Montenegro
			Netherlands
			Norway
			Portugal
			Republic of Ireland
			Slovakia
			Spain
			Sweden
			Switzerland
		Removed:

	'onto_disciplines' has been modified:
		Before:
			Biomedical Science
		After:
			Biomedical Science
			Immunogenetics
			Immunology
		Added:
			Immunogenetics
			Immunology
		Removed:

	'dataProcesses' has been modified:
		Before:
			Three monthly release cycle
			Data download (Release Archive)
			Data Download (FTP)
			Submission Tool
		After:
			Download
			Cell Queries
			Search Alleles
			Submit
		Added:
			Download
			Cell Queries
			Search Alleles
			Submit
		Removed:
			Three monthly release cycle
			Data download (Release Archive)
			Data Download (FTP)
			Submission Tool

	'onto_domains' has been modified:
		Before:
			Human leukocyte antigen complex
			Major Histocompatibility Complex
		After:
			Human leukocyte antigen complex
			Major Histocompatibility Complex
			allele
		Added:
			allele
		Removed:

	'tools' has been modified:
		Before:
			BLAST Search||http://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			Sequence Alignment Tool||http://www.ebi.ac.uk/ipd/imgt/hla/align.html
			Ambiguous Allele Combinations Search Tool|Beta|http://www.ebi.ac.uk/ipd/imgt/hla/ambig.html
			Cell Querying||http://www.ebi.ac.uk/ipd/imgt/hla/cell_query.html
			HLA Dictionary||https://www.ebi.ac.uk/ipd/imgt/hla/dictionary.html
			Allele Query||https://www.ebi.ac.uk/ipd/imgt/hla/allele.html
		After:
			BLAST||https://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			All Tools||https://www.ebi.ac.uk/ipd/imgt/hla/access.html
		Added:
			BLAST||https://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			All Tools||https://www.ebi.ac.uk/ipd/imgt/hla/access.html
		Removed:
			BLAST Search||http://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			Sequence Alignment Tool||http://www.ebi.ac.uk/ipd/imgt/hla/align.html
			Ambiguous Allele Combinations Search Tool|Beta|http://www.ebi.ac.uk/ipd/imgt/hla/ambig.html
			Cell Querying||http://www.ebi.ac.uk/ipd/imgt/hla/cell_query.html
			HLA Dictionary||https://www.ebi.ac.uk/ipd/imgt/hla/dictionary.html
			Allele Query||https://www.ebi.ac.uk/ipd/imgt/hla/allele.html

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'The FAIRsharing Team' at 12:38, 14 Jan 2019 (approved):

	'related_databases' has been modified:
		Before:
			Immuno-Polymorphism Database
			ImMunoGeneTics Information System
		After:
			Immuno-Polymorphism Database
			The European Searchable Tumour Line Database
			Human Platelet Antigens
			Killer-cell Immunoglobulin-like Receptors
			ImMunoGeneTics Information System
		Added:
			The European Searchable Tumour Line Database
			Human Platelet Antigens
			Killer-cell Immunoglobulin-like Receptors
		Removed:

	'supportLinks' has been modified:
		Before:
			FAQ|http://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
			contact form|http://www.ebi.ac.uk/support/hla.php
			email|hla@alleles.org
		After:
			FAQ|http://www.ebi.ac.uk/ipd/imgt/hla/help/faq.html
			contact form|http://www.ebi.ac.uk/support/hla.php
			email|hla@alleles.org
			help|https://www.ebi.ac.uk/ipd/imgt/hla/access.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/nomenclature/index.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/dpb.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/intro.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/citations.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/stats.html
		Added:
			help|https://www.ebi.ac.uk/ipd/imgt/hla/access.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/nomenclature/index.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/dpb.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/intro.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/citations.html
			online documentation|https://www.ebi.ac.uk/ipd/imgt/hla/stats.html
		Removed:

	'name' has been modified:
		Before: Immuno Polymorphism Database - IMGT/HLA
		After: ImMunoGeneTics Human Leukocyte Antigen Sequence Database

	'licences' has been modified:
		Before:
			IPD-IMGT/HLA Licence and Disclaimer|https://www.ebi.ac.uk/ipd/imgt/hla/licence.html|Data
		After:
			IPD-IMGT/HLA Licence and Disclaimer|https://www.ebi.ac.uk/ipd/imgt/hla/licence.html|Data
			Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)|https://creativecommons.org/licenses/by-nd/4.0/|Data
		Added:
			Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)|https://creativecommons.org/licenses/by-nd/4.0/|Data
		Removed:

	'dataProcesses' has been modified:
		Before:
			Three monthly release cycle
			Data download (FTP)
			Allele Search
		After:
			Three monthly release cycle
			Data download (Release Archive)
			Data Download (FTP)
			Submission Tool
		Added:
			Data download (Release Archive)
			Data Download (FTP)
			Submission Tool
		Removed:
			Data download (FTP)
			Allele Search

	'miriam_id' has been modified:
		Before: None
		After: 

	'tools' has been modified:
		Before:
			BLAST Search||http://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			Sequence Alignment Tool||http://www.ebi.ac.uk/ipd/imgt/hla/align.html
			Ambiguous Allele Combinations Search Tool|Beta|http://www.ebi.ac.uk/ipd/imgt/hla/ambig.html
			Cell Querying||http://www.ebi.ac.uk/ipd/imgt/hla/cell_query.html
		After:
			BLAST Search||http://www.ebi.ac.uk/ipd/imgt/hla/blast.html
			Sequence Alignment Tool||http://www.ebi.ac.uk/ipd/imgt/hla/align.html
			Ambiguous Allele Combinations Search Tool|Beta|http://www.ebi.ac.uk/ipd/imgt/hla/ambig.html
			Cell Querying||http://www.ebi.ac.uk/ipd/imgt/hla/cell_query.html
			HLA Dictionary||https://www.ebi.ac.uk/ipd/imgt/hla/dictionary.html
			Allele Query||https://www.ebi.ac.uk/ipd/imgt/hla/allele.html
		Added:
			HLA Dictionary||https://www.ebi.ac.uk/ipd/imgt/hla/dictionary.html
			Allele Query||https://www.ebi.ac.uk/ipd/imgt/hla/allele.html
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'The FAIRsharing Team' at 13:55, 05 Dec 2016 (approved):

	'name' has been modified:
		Before: IPD-IMGT/HLA
		After: Immuno Polymorphism Database - IMGT/HLA

Edits to 'https://fairsharing.org/FAIRsharing.e28v7g' by 'The FAIRsharing Team' at 04:51, 05 Dec 2016 (approved):

	'contactName' has been modified:
		Before:
			
		After:
			Steven G. E. Marsh
		Added:
		Removed:

Support

General

FAQ	IMGT/HLA FAQ
contact form	IMGT/HLA Contact Form
help	Accessing the Database
online documentation	Statistics
online documentation	HLA Nomenclature
online documentation	DPB1 T-Cell Epitope Algorithms
online documentation	About IMGT/HLA
online documentation	Publications

Additional Information

Contact

Steven G. E. Marsh ORCID

Tools

BLAST	https://www.ebi.ac.uk/ipd/imgt/hla/blast.html
All Tools	https://www.ebi.ac.uk/ipd/imgt/hla/access.html

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Download

https://www.ebi.ac.uk/ipd/imgt/hla/download.html

Data Curation

Submit

https://www.ebi.ac.uk/ipd/imgt/hla/subs/submit.html

Data Access

Cell Queries	https://www.ebi.ac.uk/ipd/imgt/hla/cell_query.html
Search Alleles	https://www.ebi.ac.uk/ipd/imgt/hla/allele.html

Publications

IMGT/HLA database--a sequence database for the human major histocompatibility complex.

Robinson J., Malik A., Parham P., Bodmer JG., Marsh SG.,
Tissue Antigens 2000