Pocket Similarity Search using Multiple-Sketches
Abbreviation:PoSSuM
Homepage http://possum.cbrc.jp/PoSSuM/
Countries that developed this resource Japan
Created in 2011
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: PoSSuM; Pocket Similarity Search using Multiple-Sketches; DOI: https://doi.org/10.25504/FAIRsharing.etqbej; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Mar 06 2021 7:50 a.m.
Record updated: Sept. 27, 2016, 11:28 a.m. by The FAIRsharing Team.
help | http://possum.cbrc.jp/PoSSuM/dataset_hel ... |
Additional Information
Contact | Kentaro Tomii |
Conditions of Use
Applies to: GeneralData Versioning
no versioning policy | No link recorded |
Data Release
biannual release (dependent on increase of PDB entries) | No link recorded |
Data Curation
computer-aided predictions | No link recorded |
Data Access
web interface | No link recorded |
file download(CSV | No link recorded |
XSL | No link recorded |
tab-delimited) | No link recorded |
Drug Search | http://possum.cbrc.jp/PoSSuM/drug_search/index.html |
Search via similarity with a known ligand-binding site | http://possum.cbrc.jp/PoSSuM/search_k.html |
Prediction of ligands which potentially bind to a site of interest | http://possum.cbrc.jp/PoSSuM/search_p.html |
PoSSuM: a database of similar protein-ligand binding and putative pockets.
Ito J., Tabei Y., Shimizu K., Tsuda K., Tomii K.,
Nucleic Acids Res. 2012
PDB-scale analysis of known and putative ligand-binding sites with structural sketches.
Ito J., Tabei Y., Shimizu K., Tomii K., Tsuda K.,
Proteins 2012
PoSSuM v.2.0: data update and a new function for investigating ligand analogs and target proteins of small-molecule drugs.
Ito J,Ikeda K,Yamada K,Mizuguchi K,Tomii K
Nucleic Acids Res 2014
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
This record is not implemented by any policy.
Record Maintainer
This record is maintained by JunichiIto
Funds
Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT), Tokyo, Japan (Government body)
Ministry of Health, Labour and Welfare, Japan (Government body)
Japan Society for the Promotion of Science, Tokyo, Japan (Consortium)
Maintains
University of Tokyo, Japan (University)
Grant Number(s)
KAKENHI 23500374 (Japan Society for the Promotion of Science, Tokyo, Japan)