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Dog Genome SNP Database

Abbreviation:DoGSD

General Information

Dog Genome SNP Database (DoGSD) is a data container for the variation information of dog/wolf genomes. It was designed and constructed as an SNPs detector and visualization tool to provide the research community a useful resource for the study of dog's population, evolution, phenotype and life habit.

Homepage https://bigd.big.ac.cn/dogsdv2/

Countries that developed this resource China

Created in 2014

Taxonomic range

Canis familiaris

Canis lupus

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: DoGSD; Dog Genome SNP Database; DOI: https://doi.org/10.25504/FAIRsharing.exc0vp; Last edited: March 2, 2020, 6:50 p.m.; Last accessed: Sep 22 2020 6:12 a.m.

Publication for citation DoGSD: the dog and wolf genome SNP database. Bai B,Zhao WM,Tang BX,Wang YQ,Wang L,Zhang Z,Yang HC,Liu YH,Zhu JW,Irwin DM,Wang GD,Zhang YP; Nucleic Acids Res ; 2014; 10.1093/nar/gku1174;

Record added: April 21, 2016, 8:43 p.m.
Record updated: March 2, 2020, 6:49 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.exc0vp' by 'The FAIRsharing Team' at 18:49, 02 Mar 2020 (approved):

	'supportLinks' has been modified:
		Before:
			help|http://dogsd.big.ac.cn/snp/pages/help/user_guide_list.jsp
		After:
			help|http://bigd.big.ac.cn/idog/pages/help/dogsd_help.jsp
			online documentation|https://bigd.big.ac.cn/dogsdv2/pages/modules/help/individual_stat.jsp
		Added:
			help|http://bigd.big.ac.cn/idog/pages/help/dogsd_help.jsp
			online documentation|https://bigd.big.ac.cn/dogsdv2/pages/modules/help/individual_stat.jsp
		Removed:
			help|http://dogsd.big.ac.cn/snp/pages/help/user_guide_list.jsp

	'licences' has been modified:
		Before:
		After:
			NGDC Data Usage Policy|https://bigd.big.ac.cn/policies|Data
		Added:
			NGDC Data Usage Policy|https://bigd.big.ac.cn/policies|Data
		Removed:

	'onto_disciplines' has been modified:
		Before:
		After:
			Comparative Genomics
			Genomics
		Added:
			Comparative Genomics
			Genomics
		Removed:

	'onto_domains' has been modified:
		Before:
			SNP
		After:
			Genome visualisation
			SNP
			genome
		Added:
			Genome visualisation
			genome
		Removed:

	'miriam_id' has been modified:
		Before: None
		After: 

	'dataProcesses' has been modified:
		Before:
			Search
			Data Download
		After:
			Search for RefSNPs/individual SNPs
			Data Download
			Browse non-redundant SNPs
			Browse for individual SNPs
		Added:
			Search for RefSNPs/individual SNPs
			Browse non-redundant SNPs
			Browse for individual SNPs
		Removed:
			Search

	'taxonomies' has been modified:
		Before:
			Canis lupus
		After:
			Canis familiaris
			Canis lupus
		Added:
			Canis familiaris
		Removed:

	'homepage' has been modified:
		Before: http://dogsd.big.ac.cn/
		After: https://bigd.big.ac.cn/dogsdv2/

Support

General

help	Help Pages
online documentation	Sample Information

Additional Information

Contact

Wang Yanqing

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

NGDC Data Usage Policy

Data Release

Data Download

https://bigd.big.ac.cn/dogsdv2/pages/modules/download/download.jsp

Data Access

Search for RefSNPs/individual SNPs	https://bigd.big.ac.cn/dogsdv2/pages/modules/indsnp/indsnp_search.jsp
Browse non-redundant SNPs	https://bigd.big.ac.cn/dogsdv2/pages/modules/refsnp/refsnp_stat.jsp
Browse for individual SNPs	https://bigd.big.ac.cn/dogsdv2/pages/modules/indsnp/indsnp_stat.jsp

Publications

DoGSD: the dog and wolf genome SNP database.

Bai B,Zhao WM,Tang BX,Wang YQ,Wang L,Zhang Z,Yang HC,Liu YH,Zhu JW,Irwin DM,Wang GD,Zhang YP
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

BIG Data Center

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

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Maintains

National Genomics Data Center (BIG Data Center), Beijing Institute of Genomics, Chinese Academy of Sciences, Bejing, China (Research institute) Lead

Dog Genome SNP Database

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