standards > reporting guideline > DOI:10.25504/FAIRsharing.exz30t
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ready Core Information for Metabolomics Reporting

Abbreviation: CIMR


Recommended
General Information
This document specifies the minimal guidelines reporting metabolomics work. It does so in a textual form and seeks in the long term to cover all application areas and analysis technologies.

Homepage https://github.com/MSI-Metabolomics-Standards-Initiative/CIMR/

Countries that developed this resource France , United Kingdom

Created in 2003

Taxonomic range



In the following recommendations:



How to cite this record FAIRsharing.org: CIMR; Core Information for Metabolomics Reporting; DOI: https://doi.org/10.25504/FAIRsharing.exz30t; Last edited: March 5, 2020, 10:17 a.m.; Last accessed: May 30 2020 7:06 a.m.


This record is maintained by salek  ORCID

Record updated: March 5, 2020, 10:17 a.m. by The FAIRsharing Team.

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In Collections
Metabolomics Standards and Databases
H2020 Phenome and Metabolome aNalysis (PhenoMenal) Project
FAIRDOM Community Standards
Minimum Information for Biological and Biomedical Investigations
Chemistry


Support

General

forum GitHub Issue Tracker
twitter @MetabolomicsSoc

Additional Information

Contact Reza Salek   ORCID

Tools

    No tools defined


Schemas

No XSD schemas defined


Access / Retrieve Data

Conditions of Use


Data Release

Download (PDF) https://github.com/MSI-Metabolomics-Standards-Initiative/CIMR/



Publications

Minimum reporting standards for plant biology context information in metabolomic studies

Oliver Fiehn, Lloyd W. Sumner, Seung Y. Rhee, Jane Ward, Julie Dickerson, Bernd Markus Lange, Geoff Lane, Ute Roessner, Robert Last, Basil Nikolau
Metabolomics 2007

View Publication

Standard reporting requirements for biological samples in metabolomics experiments: environmental context

Norman Morrison, Dan Bearden, Jacob G. Bundy, Tim Collette, Felicity Currie, Matthew P. Davey, Nathan S. Haigh, David Hancock, Oliver A. H. Jones, Simone Rochfort, Susanna-Assunta Sansone, Dalibor Štys, Quincy Teng, Dawn Field, Mark R. Viant
Metabolomics 2007

View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Implementing Databases (2)
Plantmetabolomics.org
Arabidopsis metabolomics database which provides researchers with resources to investigate the function of genes and metabolites.
MetaboLights
MetaboLights is a database for metabolomics studies, their raw experimental data and associated metadata. The database is cross-species and cross-technique and it covers metabolite structures and their reference spectra as well as their biological roles and locations. MetaboLights is the recommended metabolomics repository for a number of leading journals and ELIXIR, the European infrastructure for life science information.


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